RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 NUDT13Q86X67 352 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 MYLK4Q86YV6 388 aaPredicted RBP10.94□□□□□ -0.66
PSEN1-220ENST00000557037 SLC44A2Q8IWA5 706 aaPredicted RBP10.94□□□□□ -0.66
PSEN1-220ENST00000557037 TCAIMQ8N3R3 496 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 BPIFB2Q8N4F0 458 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 ZNF433Q8N7K0 673 aaPredicted RBP10.94□□□□□ -0.66
PSEN1-220ENST00000557037 HES6Q96HZ4 224 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 SAP130Q9H0E3 1048 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 FKRPQ9H9S5 495 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 OR10H1Q9Y4A9 318 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 SLC25A15Q9Y619 301 aa10.94□□□□□ -0.66
PSEN1-220ENST00000557037 ATP1B1P05026 303 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 PTX3P26022 381 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-220ENST00000557037 SHC1P29353 583 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 SFTPDP35247 375 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 PIK3CBP42338 1070 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 RAC1P63000 192 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 SRSF4Q08170 494 aaKnown RBP10.93□□□□□ -0.66
PSEN1-220ENST00000557037 PDSS1Q5T2R2 415 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 FCRLAQ7L513 359 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 SSX8Q7RTT4 187 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 SPATA19Q7Z5L4 167 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 CNTN4Q8IWV2 1026 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 TOR1AIP2Q8NFQ8 470 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 SLC9A6Q92581 669 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 EXT2Q93063 718 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 RNF145Q96MT1 663 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 NARFLQ9H6Q4 476 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 SAYSD1Q9NPB0 183 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 PPANQ9NQ55 473 aaKnown RBP10.93□□□□□ -0.66
PSEN1-220ENST00000557037 CD274Q9NZQ7 290 aa10.93□□□□□ -0.66
PSEN1-220ENST00000557037 REXO2Q9Y3B8 237 aaKnown RBP10.93□□□□□ -0.66
PSEN1-220ENST00000557037 CIB4A0PJX0 185 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 GOLGA6L10A6NI86 522 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 LYNX1G3V0Z9 82 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 PRKD3O94806 890 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 LYNX1P0DP58 116 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 IFNGR1P15260 489 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 ZNF17P17021 662 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 PGAM1P18669 254 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 CSNK2A2P19784 350 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-220ENST00000557037 COX5AP20674 150 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 TAS2R39P59534 338 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 E2F2Q14209 437 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 SH2D4BQ5SQS7 431 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 SULT1C3Q6IMI6 304 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 CCDC170Q8IYT3 715 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 SYCE1Q8N0S2 351 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 TXLNBQ8N3L3 684 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 GTPBP8Q8N3Z3 284 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-220ENST00000557037 RNF10Q8N5U6 811 aaKnown RBP10.92□□□□□ -0.66
PSEN1-220ENST00000557037 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.92□□□□□ -0.66
PSEN1-220ENST00000557037 C22orf15Q8WYQ4 148 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 KLHL15Q96M94 604 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 VSTM2LQ96N03 204 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 CXorf36Q9H7Y0 433 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 PDP1Q9P0J1 537 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-220ENST00000557037 NTMQ9P121 344 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 MCM8Q9UJA3 840 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 CES1P1Q9UKY3 287 aa10.92□□□□□ -0.66
PSEN1-220ENST00000557037 IGHV3-15A0A0B4J1V0 119 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 POM121CA8CG34 1229 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 CBFA2T2O43439 604 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 BANF1O75531 89 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 PDE5AO76074 875 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 IGHV3-9P01782 118 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 MSMBP08118 114 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 CTAGE8P0CG41 777 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 ADRA2CP18825 462 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 ME2P23368 584 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 PSMA4P25789 261 aaKnown RBP10.91□□□□□ -0.66
PSEN1-220ENST00000557037 SERPINF1P36955 418 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 MAGEA3P43357 314 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 ARFIP1P53367 373 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 CSTF3Q12996 717 aaKnown RBP10.91□□□□□ -0.66
PSEN1-220ENST00000557037 MORF4L2Q15014 288 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 TEDDM1Q5T9Z0 273 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 GRHL2Q6ISB3 625 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 DRICH1Q6PGQ1 229 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-220ENST00000557037 LRRC70Q7Z2Q7 622 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 CTAGE4Q8IX94 777 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 LILRA2Q8N149 483 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 KLHL29Q96CT2 875 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 CCT8L2Q96SF2 557 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 RAB1BQ9H0U4 201 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 SLITRK2Q9H156 845 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 FAM120CQ9NX05 1096 aaKnown RBP10.91□□□□□ -0.66
PSEN1-220ENST00000557037 DMGDHQ9UI17 866 aaKnown RBP10.91□□□□□ -0.66
PSEN1-220ENST00000557037 ABCG2Q9UNQ0 655 aa10.91□□□□□ -0.66
PSEN1-220ENST00000557037 KERAO60938 352 aa10.9□□□□□ -0.66
PSEN1-220ENST00000557037 TTC4O95801 387 aa10.9□□□□□ -0.66
PSEN1-220ENST00000557037 ANGPTL1O95841 491 aa10.9□□□□□ -0.66
PSEN1-220ENST00000557037 MBD3O95983 291 aa10.9□□□□□ -0.66
PSEN1-220ENST00000557037 PNPP00491 289 aa10.9□□□□□ -0.66
PSEN1-220ENST00000557037 KLK1P06870 262 aa10.9□□□□□ -0.66
PSEN1-220ENST00000557037 ENPP1P22413 925 aa10.9□□□□□ -0.66
PSEN1-220ENST00000557037 RFX3P48380 749 aa10.9□□□□□ -0.66
PSEN1-220ENST00000557037 CLK3P49761 638 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms