RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FNDC3BQ53EP0 1204 aaKnown RBP10.63□□□□□ -0.71
SRP54-213ENST00000556994 TOR2AQ5JU69 321 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 HBMQ6B0K9 141 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 LYPD4Q6UWN0 246 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 C16orf62Q7Z3J2 963 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 LRRTM4Q86VH4 590 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 LRRC28Q86X40 367 aaPredicted RBP10.63□□□□□ -0.71
SRP54-213ENST00000556994 ACBD7Q8N6N7 88 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 ACOT4Q8N9L9 421 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.63□□□□□ -0.71
SRP54-213ENST00000556994 OR10H4Q8NGA5 316 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 CCDC120Q96HB5 630 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 SCN2AQ99250 2005 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 TEX12Q9BXU0 123 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 TTTY10Q9BZA0 68 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 DPH1Q9BZG8 443 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 UBQLN3Q9H347 655 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 FOLH1BQ9HBA9 442 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 BEX1Q9HBH7 125 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 SLCO1C1Q9NYB5 712 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 COQ3Q9NZJ6 369 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 ING4Q9UNL4 249 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 ASB4Q9Y574 426 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 CACNG2Q9Y698 323 aa10.63□□□□□ -0.71
SRP54-213ENST00000556994 SNRNP200O75643 2136 aaKnown RBP10.62□□□□□ -0.71
SRP54-213ENST00000556994 LOC105371267A0A1B0GV96 52 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 HIDE1A8MVS5 230 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 J3QRE1 110 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SCAMP1O15126 338 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 HYAL3O43820 417 aaPredicted RBP10.62□□□□□ -0.71
SRP54-213ENST00000556994 DHFRP00374 187 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ZGLP1P0C6A0 271 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 HK1P19367 917 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 NDUFV2P19404 249 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SSTR2P30874 369 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ACVR1BP36896 505 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 MTNR1BP49286 362 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 CCR6P51684 374 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 BTG1P62324 171 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SFXN4Q6P4A7 337 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 BHLHB9Q6PI77 547 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 TEX261Q6UWH6 196 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 DGLUCYQ7Z3D6 616 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 CEACAM19Q7Z692 300 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SYT9Q86SS6 491 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 OR13C5Q8NGS8 318 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 OR5W2Q8NH69 310 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ACOT12Q8WYK0 555 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 TTC9Q92623 222 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 COL26A1Q96A83 441 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 DACT3Q96B18 629 aaPredicted RBP10.62□□□□□ -0.71
SRP54-213ENST00000556994 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.62□□□□□ -0.71
SRP54-213ENST00000556994 KCNN2Q9H2S1 579 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 CDCP1Q9H5V8 836 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SYNPO2LQ9H987 977 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ADAM29Q9UKF5 820 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 MAFFQ9ULX9 164 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ENTPD4Q9Y227 616 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 U3KQ87 197 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 CENPVL1A0A0U1RR11 272 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 DAPL1A0PJW8 107 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 CIB4A0PJX0 185 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SLC9B1P1A6NJY1 282 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SLC22A5O76082 557 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 HIST1H1TP22492 207 aaPredicted RBP10.62□□□□□ -0.71
SRP54-213ENST00000556994 STOMP27105 288 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 GIFP27352 417 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ACSL1P33121 698 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ANXA11P50995 505 aaKnown RBP10.62□□□□□ -0.71
SRP54-213ENST00000556994 RPS7P62081 194 aaKnown RBP10.62□□□□□ -0.71
SRP54-213ENST00000556994 DPTQ07507 201 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ARHGAP19Q14CB8 494 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 POU4F3Q15319 338 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SLC36A2Q495M3 483 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 METRNLQ641Q3 311 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 CNKSR3Q6P9H4 555 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ESPNLQ6ZVH7 1005 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 MBOAT2Q6ZWT7 520 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 OAFQ86UD1 273 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SLC16A11Q8NCK7 471 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ZNF680Q8NEM1 530 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 C17orf47Q8NEP4 570 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 TRMT10AQ8TBZ6 339 aaKnown RBP10.62□□□□□ -0.71
SRP54-213ENST00000556994 MS4A6EQ96DS6 147 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 SLC35A4Q96G79 324 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 C12orf66Q96MD2 445 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 ZFP3Q96NJ6 502 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 UBL7Q96S82 380 aaPredicted RBP10.62□□□□□ -0.71
SRP54-213ENST00000556994 OR51V1Q9H2C8 321 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 PIGUQ9H490 435 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 NT5DC2Q9H857 520 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 PRDM7Q9NQW5 492 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 B3GNT2Q9NY97 397 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 PRKAG2Q9UGJ0 569 aa10.62□□□□□ -0.71
SRP54-213ENST00000556994 TEX13CA0A0J9YWL9 993 aa10.61□□□□□ -0.71
SRP54-213ENST00000556994 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.61□□□□□ -0.71
SRP54-213ENST00000556994 SYT5O00445 386 aa10.61□□□□□ -0.71
SRP54-213ENST00000556994 EMC8O43402 210 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms