RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 BCKDKO14874 412 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 NDUFB5O43674 189 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 NPIPA8P0DM63 369 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 ATP12AP54707 1039 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 WIPI1Q5MNZ9 446 aaPredicted RBP22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 COX20Q5RI15 118 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 YRDCQ86U90 279 aaKnown RBP22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 ZNF527Q8NB42 609 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 AURKBQ96GD4 344 aaPredicted RBP22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 NMUR2Q9GZQ4 415 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 ZNF350Q9GZX5 532 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 MRGBPQ9NV56 204 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 MED11Q9P086 117 aa22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 MRPS18CQ9Y3D5 142 aaKnown RBP22.35■■□□□ 1.17
SDR39U1-221ENST00000556707 CCL21O00585 134 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 GUSBP08236 651 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 HOXB9P17482 250 aaPredicted RBP22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 DPP4P27487 766 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 MVDP53602 400 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 DSCR4P56555 118 aaPredicted RBP22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 PER3P56645 1201 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 FUT5Q11128 374 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 KLHL26Q53HC5 615 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 PAGE3Q5JUK9 113 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 LRIF1Q5T3J3 769 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 MISPQ8IVT2 679 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 TSPEARQ8WU66 669 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 C10orf82Q8WW14 230 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 ROPN1LQ96C74 230 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 POLE3Q9NRF9 147 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 TNFRSF10DQ9UBN6 386 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 DKKL1Q9UK85 242 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 ACAD8Q9UKU7 415 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 SLC6A5Q9Y345 797 aa22.34■■□□□ 1.17
SDR39U1-221ENST00000556707 C15orf38-AP3S2A0A0A6YYH1 394 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 PRAMEF27A3QJZ7 478 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 FCMRO60667 390 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 ZIC2O95409 532 aaPredicted RBP22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 LDLRP01130 860 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 GXYLT1Q4G148 440 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 EMC4Q5J8M3 183 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 AP1ARQ63HQ0 302 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 GATSQ8NAP1 163 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 OR14L1PQ8NHC6 308 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 SSC4DQ8WTU2 575 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 PTGES2Q9H7Z7 377 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 TAS2R10Q9NYW0 307 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 MKLN1Q9UL63 735 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 LIPT1Q9Y234 373 aa22.33■■□□□ 1.17
SDR39U1-221ENST00000556707 ZIC3O60481 467 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 GYS2P54840 703 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 CRYZQ08257 329 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 GANABQ14697 944 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 GPR68Q15743 365 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 CD226Q15762 336 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 NHSL2Q5HYW2 709 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 WLSQ5T9L3 541 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 OLIG3Q7RTU3 272 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 MTERF4Q7Z6M4 381 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 OR5M9Q8NGP3 310 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 SAP130Q9H0E3 1048 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 TP63Q9H3D4 680 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 SAR1AQ9NR31 198 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 PNPLA3Q9NST1 481 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 SLC25A37Q9NYZ2 338 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 SLAMF8Q9P0V8 285 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 LEF1Q9UJU2 399 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 MEMO1Q9Y316 297 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 WDR45Q9Y484 360 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 DTNAQ9Y4J8 743 aa22.32■■□□□ 1.16
SDR39U1-221ENST00000556707 WIPF3A6NGB9 483 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 H3BNH8 94 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 CLIC1O00299 241 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 KIAA0513O60268 411 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 ESRRAP11474 423 aaPredicted RBP22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 MSX1P28360 303 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 LSP1P33241 339 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 GCKP35557 465 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 CRATP43155 626 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 SEC24CP53992 1094 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 ZNF141Q15928 474 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 GPAT3Q53EU6 434 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 VASNQ6EMK4 673 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 TYW3Q6IPR3 259 aaKnown RBP22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 MTFR2Q6P444 385 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 C3P1Q6ZMU1 363 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 FRRS1Q6ZNA5 592 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 IFNEQ86WN2 208 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 MSRB3Q8IXL7 192 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 EID3Q8N140 333 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 PHOSPHO1Q8TCT1 267 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 C1GALT1C1Q96EU7 318 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 TRNT1Q96Q11 434 aaKnown RBP22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 TIMP4Q99727 224 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 RAD21L1Q9H4I0 556 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 SUCOQ9UBS9 1254 aaKnown RBP22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 KCNE5Q9UJ90 142 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 NDUFAF1Q9Y375 327 aa22.31■■□□□ 1.16
SDR39U1-221ENST00000556707 CACNA1CQ13936 2221 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms