RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 SKP2Q13309 424 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 DDX39BQ13838 428 aaKnown RBP8.04□□□□□ -1.12
MARK3-210ENST00000556463 TMEM95Q3KNT9 176 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 ARSIQ5FYB1 569 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 XKR6Q5GH73 641 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 KRBOX4Q5JUW0 171 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 PLEKHS1Q5SXH7 462 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 ARMC12Q5T9G4 340 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 RNF219Q5W0B1 726 aaPredicted RBP8.04□□□□□ -1.12
MARK3-210ENST00000556463 TRMT11Q7Z4G4 463 aaKnown RBP8.04□□□□□ -1.12
MARK3-210ENST00000556463 BCDIN3DQ7Z5W3 292 aaKnown RBP8.04□□□□□ -1.12
MARK3-210ENST00000556463 ACOT12Q8WYK0 555 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 WDR34Q96EX3 536 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 OR4K3Q96R72 315 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 SLC35A5Q9BS91 424 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 DNTTIP1Q9H147 329 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 EXTL2Q9UBQ6 330 aa8.04□□□□□ -1.12
MARK3-210ENST00000556463 PLXNA2O75051 1894 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 TRBC2A0A5B9 178 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 SOX14O95416 240 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 WDPCPO95876 746 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 LIMS3P0CW19 117 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 LIMS4P0CW20 117 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 GIFP27352 417 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 PRKAR1BP31321 381 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 CRATP43155 626 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 BLOC1S1P78537 153 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 RAB40BQ12829 278 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 DOC2AQ14183 400 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 HEPACAMQ14CZ8 416 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 SLC5A12Q1EHB4 618 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 BEX5Q5H9J7 111 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 RNF180Q86T96 592 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ASPGQ86U10 573 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 NAA40Q86UY6 237 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 TRPV1Q8NER1 839 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 WFIKKN2Q8TEU8 576 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 PIGQQ9BRB3 760 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 REEP4Q9H6H4 257 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 A4GALTQ9NPC4 353 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 CBLCQ9ULV8 474 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 FKBP7Q9Y680 259 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 CENPFP49454 3210 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 DOCK3Q8IZD9 2030 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 DOCK6Q96HP0 2047 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.03□□□□□ -1.12
MARK3-210ENST00000556463 MTMR11A4FU01 709 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 OR6C65A6NJZ3 312 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 E7EQ34 232 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 M0QZ92 97 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 SOX15O60248 233 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 LCMT2O60294 686 aaKnown RBP8.03□□□□□ -1.12
MARK3-210ENST00000556463 NDUFB7P17568 137 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ITPKAP23677 461 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 PDHA2P29803 388 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 GSTM5P46439 218 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 SLC11A2P49281 568 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 CCR6P51684 374 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 RNF4P78317 190 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 PRKCZQ05513 592 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ACSM2AQ08AH3 577 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ZNF155Q12901 538 aaPredicted RBP8.03□□□□□ -1.12
MARK3-210ENST00000556463 ZNF177Q13360 481 aaPredicted RBP8.03□□□□□ -1.12
MARK3-210ENST00000556463 GPR176Q14439 515 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 GANABQ14697 944 aaKnown RBP8.03□□□□□ -1.12
MARK3-210ENST00000556463 ARHGAP15Q53QZ3 475 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 TM4SF20Q53R12 229 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 PDZD11Q5EBL8 140 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ATAT1Q5SQI0 421 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 MFSD14CQ5VZR4 134 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ACSM2BQ68CK6 577 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 SLC25A25Q6KCM7 469 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 LINGO4Q6UY18 593 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 TMEM91Q6ZNR0 172 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 OR1M1Q8NGA1 313 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 GAL3ST3Q96A11 431 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 DPYSL5Q9BPU6 564 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 TMED9Q9BVK6 235 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 AP5M1Q9H0R1 490 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 TMEM231Q9H6L2 316 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 EVA1AQ9H8M9 152 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ZFP57Q9NU63 452 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 POT1Q9NUX5 634 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 MGAT4CQ9UBM8 478 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 ZNF69Q9UC07 566 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 COL4A6Q14031 1691 aa8.03□□□□□ -1.12
MARK3-210ENST00000556463 TUBAL3A6NHL2 446 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 RHPN2P1A8MT19 583 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 KHNYNO15037 678 aaKnown RBP8.02□□□□□ -1.12
MARK3-210ENST00000556463 NPC1O15118 1278 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 BRINP1O60477 761 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 SDC3O75056 442 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 SOCS5O75159 536 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 STC2O76061 302 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 IL33O95760 270 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 IFNW1P05000 195 aa8.02□□□□□ -1.12
MARK3-210ENST00000556463 ANXA4P09525 319 aaPredicted RBP8.02□□□□□ -1.12
MARK3-210ENST00000556463 OR12D1P0DN82 309 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms