RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 LRIF1Q5T3J3 769 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 FAM46CQ5VWP2 391 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 CES5AQ6NT32 575 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 TMEM88Q6PEY1 159 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 IL20RBQ6UXL0 311 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 RNF165Q6ZSG1 346 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 GPRIN3Q6ZVF9 776 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 RNF144BQ7Z419 303 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 RBM23Q86U06 439 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 RTN4RL2Q86UN3 420 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 CPNE9Q8IYJ1 553 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 FAM9CQ8IZT9 166 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 PGAM4Q8N0Y7 254 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 GHDCQ8N2G8 530 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 SIDT2Q8NBJ9 832 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 PPFIBP2Q8ND30 876 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 GPR26Q8NDV2 337 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 DDHD1Q8NEL9 900 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 OR6K2Q8NGY2 324 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 B4GALNT2Q8NHY0 566 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ITFG1Q8TB96 612 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 MAPK15Q8TD08 544 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 MCOLN3Q8TDD5 553 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 UBTD2Q8WUN7 234 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ATL1Q8WXF7 558 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 NSMAFQ92636 917 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 SLC25A28Q96A46 364 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ZNF514Q96K75 400 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 VPS35Q96QK1 796 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 OR52B2Q96RD2 323 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ZNF382Q96SR6 550 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 THTPAQ9BU02 230 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 SPATA16Q9BXB7 569 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 C1QTNF5Q9BXJ0 243 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 PRSS22Q9GZN4 317 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 PPIL3Q9H2H8 161 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 VCX3BQ9H321 246 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 VCX2Q9H322 139 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 CDCP1Q9H5V8 836 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 SLC28A3Q9HAS3 691 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 FARSBQ9NSD9 589 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 GID8Q9NWU2 228 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 UBAP1Q9NZ09 502 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 UPB1Q9UBR1 384 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 PCTPQ9UKL6 214 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ANGPTL2Q9UKU9 493 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 DTX4Q9Y2E6 619 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 COMMD3-BMI1R4GMX3 469 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 PIKFYVEQ9Y2I7 2098 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 TTC34A8MYJ7 566 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 STMND1H3BQB6 276 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 TRIM77I1YAP6 450 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 PSMD12O00232 456 aaPredicted RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 CDC7O00311 574 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 SLC28A1O00337 649 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 KPNA3O00505 521 aaPredicted RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 TBX19O60806 448 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 RNASEH1O60930 286 aaKnown RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 ATG13O75143 517 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 STK16O75716 305 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 MFN2O95140 757 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 MT-CO3P00414 261 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 IGHEP01854 428 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 CSF2P04141 144 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 APODP05090 189 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 YES1P07947 543 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 PRSS56P0CW18 603 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 CLUP10909 449 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 UGT1A6P19224 532 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 DRD5P21918 477 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 UGT1A1P22309 533 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 UGT1A4P22310 534 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 HMOX2P30519 316 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 PKLRP30613 574 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 UGT1A3P35503 534 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 UGT1A5P35504 534 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 GCKP35557 465 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 MMP12P39900 470 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 CCNG1P51959 295 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 SMSP52788 366 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 PGGT1BP53609 377 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ATP5IP56385 69 aaPredicted RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 SIRPAP78324 504 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 B4GALNT1Q00973 533 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 GALK2Q01415 458 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 RUNX3Q13761 415 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 FASTKQ14296 549 aaKnown RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 LARS2Q15031 903 aaKnown RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 SHHQ15465 462 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 MAPK11Q15759 364 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ETFDHQ16134 617 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 KIF19Q2TAC6 998 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 SLC36A3Q495N2 470 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 CDONQ4KMG0 1287 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 COQ5Q5HYK3 327 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 FAM78AQ5JUQ0 283 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 GPRC6AQ5T6X5 926 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 HENMT1Q5T8I9 393 aaKnown RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 VWA5B1Q5TIE3 1220 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 C1orf146Q5VVC0 180 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms