RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 ARFIP2P53365 341 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SUMO3P55854 103 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ABCE1P61221 599 aaKnown RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ERVK-8P63133 956 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 TNFRSF17Q02223 184 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 CSTF3Q12996 717 aaKnown RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 BIKQ13323 160 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 MFAP5Q13361 173 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF169Q14929 603 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PDCD2Q16342 344 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 GGTA1PQ4G0N0 100 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SPIN4Q56A73 249 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF766Q5HY98 468 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PLAG1Q6DJT9 500 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 TMEM108Q6UXF1 575 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 DGAT2L6Q6ZPD8 337 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SLC29A4Q7RTT9 530 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SZRD1Q7Z422 152 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 MMP21Q8N119 569 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ZCCHC7Q8N3Z6 543 aaKnown RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 HORMAD2Q8N7B1 307 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF321PQ8N8H1 164 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 GBP7Q8N8V2 638 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 MORN4Q8NDC4 146 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 OR5L2Q8NGL0 311 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 OR14A16Q8NHC5 309 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 CLHC1Q8NHS4 586 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SLC2A12Q8TD20 617 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 C16orf78Q8WTQ4 265 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PTPMT1Q8WUK0 201 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PSMF1Q92530 271 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 KAT2AQ92830 837 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PNPLA2Q96AD5 504 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 TUBGCP3Q96CW5 907 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 CHMP6Q96FZ7 201 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 VMP1Q96GC9 406 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SENP5Q96HI0 755 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 FBXL20Q96IG2 436 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 JSRP1Q96MG2 331 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 WDR77Q9BQA1 342 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ACPTQ9BZG2 426 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 AMBRA1Q9C0C7 1298 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 LRTM1Q9HBL6 345 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 TMBIM4Q9HC24 238 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 MMP25Q9NPA2 562 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ADAP2Q9NPF8 381 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 MIEF1Q9NQG6 463 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 AGPAT4Q9NRZ5 378 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ASF1BQ9NVP2 202 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 TEX10Q9NXF1 929 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SH3BP4Q9P0V3 963 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 LRFN1Q9P244 771 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 GIMAP2Q9UG22 337 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ZDHHC2Q9UIJ5 367 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 UTS2RQ9UKP6 389 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ERVK-19Q9WJR5 959 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 DMRT1Q9Y5R6 373 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PTGDR2Q9Y5Y4 395 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PRRC2CQ9Y520 2896 aaKnown RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 KIAA1549Q9HCM3 1950 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 CACNA1DQ01668 2161 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 TRAV17A0A0B4J275 112 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 C2orf92A0A1B0GVN3 265 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 OR5H15A6NDH6 313 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 A8MVJ9 347 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 G3V3Y1 287 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 H3BQF6 201 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 PIP5K1BO14986 540 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 TM9SF1O15321 606 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 BIRC5O15392 142 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 CFLARO15519 480 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 TYROBPO43914 113 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 PRAMEF2O60811 474 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 NME6O75414 186 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-238ENST00000556288 OR2J2O76002 312 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 PDE9AO76083 593 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 SEMA3DO95025 777 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 RASAL1O95294 804 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 SERPINE1P05121 402 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 SP1P08047 785 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 SLC35E2P0CK97 266 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 HSD3B1P14060 373 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 CPMP14384 443 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 PLA2G2AP14555 144 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 RHCEP18577 417 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 EFNA1P20827 205 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-238ENST00000556288 GNLYP22749 145 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 TIA1P31483 386 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATXN3-238ENST00000556288 MPIP34949 423 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 RFC3P40938 356 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 RFX3P48380 749 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 RPL14P50914 215 aaKnown RBP4.29□□□□□ -1.72
ATXN3-238ENST00000556288 SSR4P51571 173 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 NR0B1P51843 470 aaKnown RBP4.29□□□□□ -1.72
ATXN3-238ENST00000556288 NCBP2P52298 156 aaKnown RBP eCLIP4.29□□□□□ -1.725e-7■■■■□ 25.1
ATXN3-238ENST00000556288 ARFIP1P53367 373 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 PRKAG1P54619 331 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 NME5P56597 212 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 MLF1P58340 268 aa4.29□□□□□ -1.72
ATXN3-238ENST00000556288 RPL38P63173 70 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms