RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 RPS3AP61247 264 aaKnown RBP12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PLPPR5Q32ZL2 321 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TRIM46Q7Z4K8 759 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ATG4DQ86TL0 474 aaPredicted RBP12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SLC9A6Q92581 669 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZNF524Q96C55 264 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 DDX18Q9NVP1 670 aaKnown RBP12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PTGDR2Q9Y5Y4 395 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PLCE1Q9P212 2302 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ALPK2Q86TB3 2170 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 C7orf72A4D263 438 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CXCL13O43927 109 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CRLF1O75462 422 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NGFRP08138 427 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 DANCRP0C864 163 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ACP2P11117 423 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FCGR2AP12318 317 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PPP3CBP16298 524 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TAC1P20366 129 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PSMB1P20618 241 aaKnown RBP12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FRKP42685 505 aaPredicted RBP12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 RFX3P48380 749 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SGCBQ16585 318 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ANKRD26P1Q6NSI1 321 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NOXRED1Q6NXP6 359 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SPATA3Q8NHX4 192 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CDC26Q8NHZ8 85 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GFM2Q969S9 779 aaKnown RBP12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TBL1XR1Q9BZK7 514 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ACTR6Q9GZN1 396 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 MID1IP1Q9NPA3 183 aa12.81□□□□□ -0.36
CHMP4BP1-201ENST00000556017 EXOC1LA0A1B0GW35 172 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 A0A1W2PRB8 838 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GOLGA8RI6L899 631 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NTN1O95631 604 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SOD3P08294 240 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ABHD2P08910 425 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 AGTR1P30556 359 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 RAC1P63000 192 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SLC18A2Q05940 514 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CD226Q15762 336 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SPDYAQ5MJ70 313 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ADAM5Q6NVV9 412 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 DNM1P46Q6ZS02 220 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 LCA5Q86VQ0 697 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SLC22A9Q8IVM8 553 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GABRG1Q8N1C3 465 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GATSQ8NAP1 163 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SLC16A11Q8NCK7 471 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FAM76AQ8TAV0 307 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TMEM171Q8WVE6 324 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 IFT81Q8WYA0 676 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NEUROG1Q92886 237 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CIDECQ96AQ7 238 aaPredicted RBP12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FCRL1Q96LA6 429 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 RNF145Q96MT1 663 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TSPYL1Q9H0U9 437 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 OR10A4Q9H209 315 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 EQTNQ9NQ60 294 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 MIEF1Q9NQG6 463 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 MED17Q9NVC6 651 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 EMC9Q9Y3B6 208 aa12.8□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TNFSF11O14788 317 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 OIP5O43482 229 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 RSL1D1O76021 490 aaKnown RBP12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 KCNK2O95069 426 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 LINGO3P0C6S8 592 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NTSP30990 170 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ATP5J2P56134 94 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CKAP4Q07065 602 aaKnown RBP12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 HSPB3Q12988 150 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SLC29A2Q14542 456 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 DUSP5Q16690 384 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GLE1Q53GS7 698 aaKnown RBP12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CPTPQ5TA50 214 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FRMD7Q6ZUT3 714 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NUFIP2Q7Z417 695 aaKnown RBP12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 WFDC8Q8IUA0 241 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 OR2T11Q8NH01 316 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 OR2V1Q8NHB1 315 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ACTRT2Q8TDY3 377 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 RNF128Q8TEB7 428 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 AKAP1Q92667 903 aaKnown RBP eCLIP12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 C16orf58Q96GQ5 468 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZNF764Q96H86 408 aaPredicted RBP12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SRXN1Q9BYN0 137 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TXLNGYQ9BZA5 131 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TMEM185BQ9H7F4 350 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ING1Q9UK53 422 aaPredicted RBP12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 LAMP3Q9UQV4 416 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 STK38LQ9Y2H1 464 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GPR52Q9Y2T5 361 aa12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 WBP11Q9Y2W2 641 aaKnown RBP12.79□□□□□ -0.36
CHMP4BP1-201ENST00000556017 A0A087WZY1 265 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TTC36A6NLP5 189 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NDUFB5O43674 189 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TBX19O60806 448 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms