RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 IFNW1P05000 195 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 GKN3PP0CG01 181 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 NID1P14543 1247 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 KRT20P35900 424 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 PSMD4P55036 377 aaKnown RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 FBXW4P57775 412 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 PLAURQ03405 335 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 KCNC4Q03721 635 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 GANABQ14697 944 aaKnown RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 ZNF141Q15928 474 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 NDUFAF6Q330K2 333 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 TBC1D25Q3MII6 688 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 LIN52Q52LA3 116 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 DHRS4L2Q6PKH6 230 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 TSPYL5Q86VY4 417 aaPredicted RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 RAB43Q86YS6 212 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 TAGAPQ8N103 731 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 SIRT6Q8N6T7 355 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 NXPE2Q96DL1 559 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 CENPNQ96H22 339 aaPredicted RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 ZNF300Q96RE9 604 aaPredicted RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 CIB1Q99828 191 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 RTN4RQ9BZR6 473 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 CDCP1Q9H5V8 836 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 MRTO4Q9UKD2 239 aaKnown RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 SLC13A4Q9UKG4 626 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 WASF3Q9UPY6 502 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 NTNG1Q9Y2I2 539 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 PCDHGA10Q9Y5H3 936 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 MAGED1Q9Y5V3 778 aaPredicted RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 NINQ8N4C6 2090 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 C17orf51A8MQB3 221 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 PDLIM1O00151 329 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 FFAR1O14842 300 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 CYP7B1O75881 506 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 OXSR1O95747 527 aaPredicted RBP9.38□□□□□ -0.91
SRP54-208ENST00000555557 THBS1P07996 1170 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 GUSBP08236 651 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 PRKAR1AP10644 381 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 FCGR1AP12314 374 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 PRG2P13727 222 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 HPGDP15428 266 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 CLN3Q13286 438 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 LAPTM4AQ15012 233 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 NPTX1Q15818 432 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 KLHL26Q53HC5 615 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 B3GNTL1Q67FW5 361 aaPredicted RBP9.38□□□□□ -0.91
SRP54-208ENST00000555557 OR2T5Q6IEZ7 315 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 PIWIL3Q7Z3Z3 882 aaKnown RBP9.38□□□□□ -0.91
SRP54-208ENST00000555557 TMEM179BQ7Z7N9 219 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 HS3ST5Q8IZT8 346 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 OR2T29Q8NH02 315 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 OR52J3Q8NH60 311 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 CNOT9Q92600 299 aaKnown RBP9.38□□□□□ -0.91
SRP54-208ENST00000555557 PMM1Q92871 262 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 RASL10BQ96S79 203 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 TRIM45Q9H8W5 580 aaPredicted RBP9.38□□□□□ -0.91
SRP54-208ENST00000555557 UBQLN4Q9NRR5 601 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 ETAA1Q9NY74 926 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 DNAJB9Q9UBS3 223 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 OAZ3Q9UMX2 235 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 SLC9A8Q9Y2E8 581 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 TESMINQ9Y4I5 508 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 LAMA5O15230 3695 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 AKAP13Q12802 2813 aa9.38□□□□□ -0.91
SRP54-208ENST00000555557 CDHR4A6H8M9 788 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 SYT5O00445 386 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 ADAM11O75078 769 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 DEAF1O75398 565 aaPredicted RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 PPM1BO75688 479 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 RPSAP08865 295 aaKnown RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 UBTFL6P0CB48 400 aaPredicted RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 ICAM2P13598 275 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 RRM2P31350 389 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 PNLIPRP2P54317 469 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 PIN1Q13526 163 aaPredicted RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 CD226Q15762 336 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 NRF1Q16656 503 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 DCAF10Q5QP82 559 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 TBPL2Q6SJ96 375 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 LYPD8Q6UX82 237 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 MARCH3Q86UD3 253 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 RPS19BP1Q86WX3 136 aaKnown RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 EPHX4Q8IUS5 362 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 BRIX1Q8TDN6 353 aaKnown RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 THOC3Q96J01 351 aaKnown RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 NODALQ96S42 347 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 BARD1Q99728 777 aaKnown RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 ARHGDIGQ99819 225 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 BDH2Q9BUT1 245 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 KLHL28Q9NXS3 571 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 FAM32AQ9Y421 112 aaKnown RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 DTNAQ9Y4J8 743 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 ENPP4Q9Y6X5 453 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 LOC400499M0QZD8 3231 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 SERINC4A6NH21 518 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 OR6C70A6NIJ9 312 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 SCDO00767 359 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms