RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ESX1Q8N693 406 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 AQP11Q8NBQ7 271 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 OR5T3Q8NGG3 340 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 GAL3ST3Q96A11 431 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 MOAP1Q96BY2 351 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 TMEM19Q96HH6 336 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 RHNO1Q9BSD3 238 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 SORBS1Q9BX66 1292 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 SIRT3Q9NTG7 399 aaPredicted RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 RHBDL2Q9NX52 303 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 P2RX2Q9UBL9 471 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 ACAD8Q9UKU7 415 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 PADI1Q9ULC6 663 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 NUP210LQ5VU65 1888 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 A0A0A6YYD5 115 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 MAGEB3O15480 346 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 SLITRK5O94991 958 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 ALOX5P09917 674 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 OSMP13725 252 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 CD40LGP29965 261 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 IDUAP35475 653 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 TSFMP43897 325 aaKnown RBP16.14■□□□□ 0.17
SHOX-204ENST00000554971 CCT3P49368 545 aaKnown RBP16.14■□□□□ 0.17
SHOX-204ENST00000554971 STXBP1P61764 594 aaKnown RBP16.14■□□□□ 0.17
SHOX-204ENST00000554971 DCDP81605 110 aaKnown RBP16.14■□□□□ 0.17
SHOX-204ENST00000554971 MAT1AQ00266 395 aaKnown RBP16.14■□□□□ 0.17
SHOX-204ENST00000554971 PRAMEF8Q5VWM4 474 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 PRAMEF7Q5VXH5 474 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 ABHD13Q7L211 337 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 AMER2Q8N7J2 671 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 KBTBD8Q8NFY9 601 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 ZNF675Q8TD23 568 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 MR1Q95460 341 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 MMABQ96EY8 250 aaPredicted RBP16.14■□□□□ 0.17
SHOX-204ENST00000554971 SLIRPQ9GZT3 109 aaKnown RBP16.14■□□□□ 0.17
SHOX-204ENST00000554971 NMNAT1Q9HAN9 279 aaPredicted RBP16.14■□□□□ 0.17
SHOX-204ENST00000554971 SLAMF7Q9NQ25 335 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 PRDM7Q9NQW5 492 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 CTSFQ9UBX1 484 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 MED13Q9UHV7 2174 aa16.14■□□□□ 0.17
SHOX-204ENST00000554971 M0R082 166 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 MAN1A2O60476 641 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 RDH16O75452 317 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 RECKO95980 971 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 BCHEP06276 602 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 KLK3P07288 261 aaPredicted RBP16.13■□□□□ 0.17
SHOX-204ENST00000554971 PPP2R1BP30154 601 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 ST3GAL4Q11206 333 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 OXA1LQ15070 435 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 NDUFA9Q16795 377 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 TIMM50Q3ZCQ8 353 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 DCST1Q5T197 706 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 MFSD4AQ8N468 514 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 SRFBP1Q8NEF9 429 aaKnown RBP16.13■□□□□ 0.17
SHOX-204ENST00000554971 OR9Q2Q8NGE9 314 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 SFXN5Q8TD22 340 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 CT55Q8WUE5 264 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 UCK2Q9BZX2 261 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 BCL2L10Q9HD36 194 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 ZFYVE26Q68DK2 2539 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 J3KTA2 159 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 HMGN4O00479 90 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 GASTP01350 101 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 CHMP24386 653 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 C21orf33P30042 268 aaPredicted RBP16.13■□□□□ 0.17
SHOX-204ENST00000554971 LIPAP38571 399 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 NCS1P62166 190 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 ALDH6A1Q02252 535 aaKnown RBP16.13■□□□□ 0.17
SHOX-204ENST00000554971 COX10Q12887 443 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 DSG2Q14126 1118 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 TRIM16LQ309B1 348 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 MEDAGQ5VYS4 303 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 RNLSQ5VYX0 342 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 MRPL14Q6P1L8 145 aaKnown RBP16.13■□□□□ 0.17
SHOX-204ENST00000554971 KLHL17Q6TDP4 642 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 Q6ZPB1 254 aaPredicted RBP16.13■□□□□ 0.17
SHOX-204ENST00000554971 VASH2Q86V25 355 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 ZNF248Q8NDW4 579 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 NR4A3Q92570 626 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 DCSTAMPQ9H295 470 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 ZNF304Q9HCX3 659 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 SEMA3GQ9NS98 782 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 SSUH2Q9Y2M2 353 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 RAXQ9Y2V3 346 aa16.13■□□□□ 0.17
SHOX-204ENST00000554971 FUOMA2VDF0 154 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 URADA6NGE7 173 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 H0YIG0 161 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 TMPRSS11DO60235 418 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 H1F0P07305 194 aaKnown RBP16.12■□□□□ 0.17
SHOX-204ENST00000554971 CCNYL3P0C7X3 344 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 TCN2P20062 427 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 CERS1P27544 350 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 EIF2S3P41091 472 aaKnown RBP16.12■□□□□ 0.17
SHOX-204ENST00000554971 EFNA3P52797 238 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 BTN3A2P78410 334 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 INAQ16352 499 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 TMEM201Q5SNT2 666 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 TCTN3Q6NUS6 607 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 TNFAIP8L2Q6P589 184 aaPredicted RBP16.12■□□□□ 0.17
SHOX-204ENST00000554971 CD300LDQ6UXZ3 194 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms