RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SQLEQ14534 574 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 MAPK11Q15759 364 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 HEPHL1Q6MZM0 1159 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 ARSKQ6UWY0 536 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 PLXDC2Q6UX71 529 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 C10orf111Q8N326 155 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 ANKFN1Q8N957 763 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 OR4K17Q8NGC6 315 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 XAGE5Q8WWM1 108 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 STON2Q8WXE9 905 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 SPDL1Q96EA4 605 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 SH3YL1Q96HL8 342 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-214ENST00000554928 PSMG3-AS1Q96PY0 264 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 TIMP4Q99727 224 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 UGT2B28Q9BY64 529 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 TBL1XR1Q9BZK7 514 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 SLC25A37Q9NYZ2 338 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 MRTO4Q9UKD2 239 aaKnown RBP11.22□□□□□ -0.61
SYNE2-214ENST00000554928 MKLN1Q9UL63 735 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 RPH3AQ9Y2J0 694 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-214ENST00000554928 FAM215AQ9Y5M1 114 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 DNAJC13O75165 2243 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 IGLV3-32A0A0A0MS00 114 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 TNFRSF21O75509 655 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 CBR3O75828 277 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 NGFRP08138 427 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 KRT16P08779 473 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 DPP4P27487 766 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 SRD5A2P31213 254 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 PLAURQ03405 335 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 MAPK14Q16539 360 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 SYPL1Q16563 259 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ARHGAP11BQ3KRB8 267 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 FLYWCH1Q4VC44 716 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 C6orf10Q5SRN2 563 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 VASNQ6EMK4 673 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 TYW3Q6IPR3 259 aaKnown RBP11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF585AQ6P3V2 769 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 BHLHB9Q6PI77 547 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 RETREG3Q86VR2 466 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF454Q8N9F8 522 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 OR14L1PQ8NHC6 308 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ITLN2Q8WWU7 325 aaPredicted RBP11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ZG16BQ96DA0 208 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ITCHQ96J02 903 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF350Q9GZX5 532 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 QRSL1Q9H0R6 528 aaKnown RBP11.21□□□□□ -0.61
SYNE2-214ENST00000554928 RUBCNLQ9H714 662 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 UBQLN4Q9NRR5 601 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ALKBH4Q9NXW9 302 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 TAS2R10Q9NYW0 307 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 DKKL1Q9UK85 242 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 ACAD8Q9UKU7 415 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 PCDHB14Q9Y5E9 798 aa11.21□□□□□ -0.61
SYNE2-214ENST00000554928 FREM3P0C091 2139 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 GTF3C1Q12789 2109 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 MYO7BQ6PIF6 2116 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 HECTD1Q9ULT8 2610 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 OR14I1A6ND48 311 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 NDUFB5O43674 189 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 CHRM4P08173 479 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 ETFAP13804 333 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 ATP6V1C1P21283 382 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 COL8A1P27658 744 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 KHKP50053 298 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 ARFIP2P53365 341 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 SEC24CP53992 1094 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 ATP12AP54707 1039 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 CASP6P55212 293 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 GFRA1P56159 465 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 ZNF117Q03924 483 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 CHRNEQ04844 493 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 GPR68Q15743 365 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 KLHL26Q53HC5 615 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 PDZK1Q5T2W1 519 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 CBLN3Q6UW01 205 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 FRRS1Q6ZNA5 592 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 MSANTD1Q6ZTZ1 278 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 SEM1Q6ZVN7 128 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 ULK2Q8IYT8 1036 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 ZNF614Q8N883 585 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 C10orf82Q8WW14 230 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 SARAFQ96BY9 339 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 ROPN1LQ96C74 230 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 C1GALT1C1Q96EU7 318 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 WDYHV1Q96HA8 205 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 G6PC3Q9BUM1 346 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 TRIM8Q9BZR9 551 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 IKZF5Q9H5V7 419 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 TPT1P8Q9HAU6 139 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 DOPEY1Q5JWR5 2465 aa11.2□□□□□ -0.62
SYNE2-214ENST00000554928 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-214ENST00000554928 UTP20O75691 2785 aaKnown RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 DIDO1Q9BTC0 2240 aaKnown RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 TRBV5-3A0A0A0MS03 114 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 CLDN24A6NM45 220 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 E9PLN8 166 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms