RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 MFSD4BQ5TF39 518 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ANXA8L1Q5VT79 327 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 REP15Q6BDI9 236 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PPP4R4Q6NUP7 873 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 SLC2A7Q6PXP3 512 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 DLEU7Q6UYE1 221 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 DGAT2L6Q6ZPD8 337 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 LANCL3Q6ZV70 420 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF551Q7Z340 670 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 LRRC25Q8N386 305 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 NATD1Q8N6N6 113 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 AMER2Q8N7J2 671 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ENDOVQ8N8Q3 282 aaKnown RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PLPP5Q8NEB5 264 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 OR2Y1Q8NGV0 311 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 RP9Q8TA86 221 aaKnown RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 DOK4Q8TEW6 326 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 OR5P2Q8WZ92 322 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 GTF2H4Q92759 462 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 RCN3Q96D15 328 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CMTM5Q96DZ9 223 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ZBED6CLQ96FA7 236 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 NSL1Q96IY1 281 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF578Q96N58 590 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CCDC115Q96NT0 180 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 BBS4Q96RK4 519 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 NPAS2Q99743 824 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CRB3Q9BUF7 120 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 MLST8Q9BVC4 326 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ALOXE3Q9BYJ1 711 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PAIP1Q9H074 479 aaKnown RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 THSD1Q9NS62 852 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 SLC6A13Q9NSD5 602 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 SIRT3Q9NTG7 399 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ACSS1Q9NUB1 689 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ATAD3AQ9NVI7 634 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 TAGLN3Q9UI15 199 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 BTNL2Q9UIR0 455 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 LEF1Q9UJU2 399 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 C3orf18Q9UK00 162 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 NXT1Q9UKK6 140 aaKnown RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ENTPD4Q9Y227 616 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 FARSAQ9Y285 508 aaKnown RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 MAN2B2Q9Y2E5 1009 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 NDUFAF1Q9Y375 327 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF780BQ9Y6R6 833 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 DOCK10Q96BY6 2186 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PCSK5Q92824 1860 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 URB1O60287 2271 aaKnown RBP5.83□□□□□ -1.48
SCFD1-212ENST00000554486 LOC102723996A0A087X1L8 192 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 A0A096LPI6 279 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 TRBV5-3A0A0A0MS03 114 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 DYTNA2CJ06 578 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 UNC119BA6NIH7 251 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 BBIP1A8MTZ0 92 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 A8MUA0 341 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 C21orf140B9A014 251 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 FXYD1O00168 92 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 MRASO14807 208 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 TLX3O43711 291 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-212ENST00000554486 ALOX12BO75342 701 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 CPSF4O95639 269 aaKnown RBP5.83□□□□□ -1.48
SCFD1-212ENST00000554486 C1QCP02747 245 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 ATP1B1P05026 303 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 CYC1P08574 325 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 CT62P0C5K7 136 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 SLC35E2P0CK97 266 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 DDX5P17844 614 aaKnown RBP5.83□□□□□ -1.48
SCFD1-212ENST00000554486 S1PR1P21453 382 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 NT5EP21589 574 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 GATA3P23771 443 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 MPIP34949 423 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 PTGS2P35354 604 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 DLSTP36957 453 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 STT3AP46977 705 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 TRPC1P48995 793 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 PRIM2P49643 509 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 CDK9P50750 372 aaKnown RBP5.83□□□□□ -1.48
SCFD1-212ENST00000554486 NCBP2P52298 156 aaKnown RBP eCLIP5.83□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF134P52741 427 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 RPS16P62249 146 aaKnown RBP5.83□□□□□ -1.48
SCFD1-212ENST00000554486 HBA1P69905 142 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 PIGFQ07326 219 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 STX4Q12846 297 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 BNIP1Q12981 228 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 HSPB3Q12988 150 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 STX5Q13190 355 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 SRSF6Q13247 344 aaKnown RBP5.83□□□□□ -1.48
SCFD1-212ENST00000554486 GAB1Q13480 694 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 TP53BP2Q13625 1128 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 DYRK1AQ13627 763 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 SERTAD2Q14140 314 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 NSDHLQ15738 373 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 MAPKAPK3Q16644 382 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 PRICKLE4Q2TBC4 344 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF628Q5EBL2 1059 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 COQ5Q5HYK3 327 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 FHL5Q5TD97 284 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 FAAH2Q6GMR7 532 aa5.83□□□□□ -1.48
SCFD1-212ENST00000554486 TMEM205Q6UW68 189 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms