RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 EID2Q8N6I1 236 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 UBL4BQ8N7F7 174 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ACBD4Q8NC06 268 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 OR2L5Q8NG80 312 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 C9orf43Q8TAL5 461 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAM110DQ8TAY7 271 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NEK7Q8TDX7 302 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SORCS1Q8WY21 1168 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MAFIPQ8WZ33 124 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ST8SIA2Q92186 375 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SMPDL3AQ92484 453 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NAT6Q93015 286 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 BORCS5Q969J3 196 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FBXW5Q969U6 566 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FOXRED1Q96CU9 486 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 KLHDC7BQ96G42 594 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NUDT11Q96G61 164 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TCTN2Q96GX1 697 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC41A3Q96GZ6 507 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PPP1R16AQ96I34 528 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LGMNQ99538 433 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 JAM3Q9BX67 310 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 HRH4Q9H3N8 390 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 VIPAS39Q9H9C1 493 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MEAF6Q9HAF1 191 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TXLNGQ9NUQ3 528 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 EXD2Q9NVH0 621 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FGFR1OP2Q9NVK5 253 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PTTG2Q9NZH5 202 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF225Q9UK10 706 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ADAM30Q9UKF2 790 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PLAGL1Q9UM63 463 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ENTPD2Q9Y5L3 495 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 GCN1Q92616 2671 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 COL6A6A6NMZ7 2263 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ANKRD11Q6UB99 2663 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ANKRD36A6QL64 1941 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 DOCK9Q9BZ29 2069 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SPTY2D1-AS1A0A0U1RR47 76 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TCRBV7S2A1N4TA0A589 114 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 A8MZ25 164 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CCRL2O00421 344 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CCSO14618 274 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TCAPO15273 167 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 DUX1O43812 170 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LILRA1O75019 489 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 AVILO75366 819 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SPAG7O75391 227 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CLDN11O75508 207 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SCELO95171 688 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 WNT11O96014 354 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 GSRP00390 522 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LCKP06239 509 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PSKH1P11801 424 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MMP9P14780 707 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NDUFB7P17568 137 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NELFEP18615 380 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 EDN2P20800 178 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MGAT1P26572 445 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TEAD1P28347 426 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CRABP1P29762 137 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 S100A7P31151 101 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 APOBEC3AP31941 199 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CSF2RBP32927 897 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SOX18P35713 384 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC6A12P48065 614 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PGDP52209 483 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PDX1P52945 283 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PRKAG1P54619 331 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SEC61GP60059 68 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PPIAP62937 165 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 DHODHQ02127 395 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RELAQ04206 551 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZFP36L1Q07352 338 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF844Q08AG5 666 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ADIGQ0VDE8 80 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TRAF2Q12933 501 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SERTAD2Q14140 314 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NUMA1Q14980 2115 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ARL6IP1Q15041 203 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 USF2Q15853 346 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM41BQ5BJD5 291 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MIIPQ5JXC2 388 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ABHD17BQ5VST6 288 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF691Q5VV52 312 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 GPR107Q5VW38 600 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 HACD4Q5VWC8 232 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LIPMQ5VYY2 423 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAM151BQ6UXP7 276 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 C3P1Q6ZMU1 363 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RBM44Q6ZP01 1051 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC35D2Q76EJ3 337 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SSX9Q7RTT3 188 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 C17orf82Q86X59 251 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 STK40Q8N2I9 435 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ATP6V0D2Q8N8Y2 350 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 DCAF4L2Q8NA75 395 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 OR5D13Q8NGL4 314 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 OR6Q1Q8NGQ2 317 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 WDR36Q8NI36 951 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms