RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PLGP00747 810 aaPredicted RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 FPR1P21462 350 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 TBXA2RP21731 343 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 LCN1P31025 176 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 FRKP42685 505 aaPredicted RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 ASMTP46597 345 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 EIF1AXP47813 144 aaKnown RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 ZNF41P51814 821 aaPredicted RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 RPL38P63173 70 aaKnown RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 SLC18A2Q05940 514 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 PDE7AQ13946 482 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 ZNF385BQ569K4 471 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 PPP4R4Q6NUP7 873 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 ZCCHC12Q6PEW1 402 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 R3HCC1LQ7Z5L2 792 aaKnown RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 WDR75Q8IWA0 830 aaKnown RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 C4orf33Q8N1A6 199 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 OR2T11Q8NH01 316 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 CLHC1Q8NHS4 586 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 EPS8L3Q8TE67 593 aaKnown RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 PIGTQ969N2 578 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 PIP5K1AQ99755 562 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 EMC9Q9Y3B6 208 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 DNAJC15Q9Y5T4 150 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 SHISA8B8ZZ34 492 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 LSM1O15116 133 aaKnown RBP16.85■□□□□ 0.29
CPSF2-203ENST00000554290 AQP8O94778 261 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 KCNK2O95069 426 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 HSPA4LO95757 839 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 ALOX5P09917 674 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 ACP2P11117 423 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 HOXB4P17483 251 aaPredicted RBP16.85■□□□□ 0.29
CPSF2-203ENST00000554290 SERPINB4P48594 390 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 CTBP2P56545 445 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 PCLAFQ15004 111 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 GUSBP1Q15486 140 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 GALNTL6Q49A17 601 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 KANK2Q63ZY3 851 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 MFSD12Q6NUT3 480 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 LRIG3Q6UXM1 1119 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 GALNT10Q86SR1 603 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 GGNQ86UU5 652 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 CXorf67Q86X51 503 aaPredicted RBP16.85■□□□□ 0.29
CPSF2-203ENST00000554290 P3H2Q8IVL5 708 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 DDIASQ8IXT1 998 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 GTPBP8Q8N3Z3 284 aaPredicted RBP16.85■□□□□ 0.29
CPSF2-203ENST00000554290 SLC16A11Q8NCK7 471 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 FAM110BQ8TC76 370 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 ACTRT2Q8TDY3 377 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 CAVIN3Q969G5 261 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 ZBTB8AQ96BR9 441 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 TUBB1Q9H4B7 451 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 FANCFQ9NPI8 374 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 UBQLN4Q9NRR5 601 aa16.85■□□□□ 0.29
CPSF2-203ENST00000554290 MCTS1Q9ULC4 181 aaKnown RBP16.85■□□□□ 0.29
CPSF2-203ENST00000554290 ACANP16112 2415 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 TMEM114B3SHH9 223 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 SCDO00767 359 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 SMPD2O60906 423 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 SYNGR4O95473 234 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 FGF4P08620 206 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 ADSLP30566 484 aaPredicted RBP16.84■□□□□ 0.29
CPSF2-203ENST00000554290 CCKARP32238 428 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 PRIM2P49643 509 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 DUSP5Q16690 384 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 CPTPQ5TA50 214 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 FIGNL1Q6PIW4 674 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 MISPQ8IVT2 679 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 LRRC75A-AS1Q8N1F1 130 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 COX18Q8N8Q8 333 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 GATSQ8NAP1 163 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 OR6K3Q8NGY3 331 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 FBXO30Q8TB52 745 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.84■□□□□ 0.29
CPSF2-203ENST00000554290 GIMAP5Q96F15 307 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 GMPPAQ96IJ6 420 aaPredicted RBP16.84■□□□□ 0.29
CPSF2-203ENST00000554290 KLHL4Q9C0H6 718 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 EML4Q9HC35 981 aaKnown RBP16.84■□□□□ 0.29
CPSF2-203ENST00000554290 PLSCR4Q9NRQ2 329 aa16.84■□□□□ 0.29
CPSF2-203ENST00000554290 C7orf72A4D263 438 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 SIAH2O43255 324 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 INHBBP09529 407 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 BCKDHAP12694 445 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 PPP3CBP16298 524 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 ME2P23368 584 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 MAPK1P28482 360 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 HPCAL1P37235 193 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 RPL3P39023 403 aaKnown RBP16.83■□□□□ 0.28
CPSF2-203ENST00000554290 RAC1P63000 192 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 MLC1Q15049 377 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 ACKR1Q16570 336 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 EXOC3L2Q2M3D2 409 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 PDSS1Q5T2R2 415 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 ZNF550Q7Z398 422 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 OR10D3Q8NH80 312 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 TWIST2Q8WVJ9 160 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 JADE3Q92613 823 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 CHMP6Q96FZ7 201 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms