RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SMCO4Q9NRQ5 59 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 C1GALT1Q9NS00 363 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 MRPS18AQ9NVS2 196 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 TAS2R5Q9NYW4 299 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 SPG21Q9NZD8 308 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 VSX1Q9NZR4 365 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 A0A087X0M5 115 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 A0A0A6YYC8 382 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 A0A1B0GX30 115 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 LRRN3E7EW58 273 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 FAM227AF5H4B4 570 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 H7C0S8 307 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 I3L1I5 382 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 HYAL3O43820 417 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 B4GALT3O60512 393 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 CREBL2O60519 120 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 UBL3O95164 117 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 IFNA2P01563 188 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 LIMS3P0CW19 117 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 LIMS4P0CW20 117 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 ADORA2BP29275 332 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 SHC1P29353 583 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 AQP1P29972 269 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 CD86P42081 329 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 MECP2P51608 486 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 CCR9P51686 369 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 BCL2L1Q07817 233 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 ITKQ08881 620 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 FOXO1Q12778 655 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 DHCR24Q15392 516 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 SYT14P1Q58G82 188 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 DNLZQ5SXM8 178 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 THEM4Q5T1C6 240 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 FAM69AQ5T7M9 428 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 ATPAF1Q5TC12 328 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 C18orf63Q68DL7 685 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 SFRP4Q6FHJ7 346 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 KIAA1161Q6NSJ0 714 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 CRTC1Q6UUV9 634 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 SLC30A8Q8IWU4 369 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 FAM26EQ8N5C1 309 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 OR10J5Q8NHC4 309 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 PIGKQ92643 395 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 C14orf79Q96F83 325 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 TEFMQ96QE5 360 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 CDCA3Q99618 268 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 ZDHHC5Q9C0B5 715 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 TGIF2Q9GZN2 237 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 LRRN3Q9H3W5 708 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 RIMS4Q9H426 269 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 TBC1D17Q9HA65 648 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 ASF1BQ9NVP2 202 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 ASB6Q9NWX5 421 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 NUDT4Q9NZJ9 180 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 STOX2Q9P2F5 926 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 WASF3Q9UPY6 502 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 A0A0G2JK05 382 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 MCIDASD6RGH6 385 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 HCRTO43612 131 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 LDB2O43679 373 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 MAFKO60675 156 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 KHDRBS3O75525 346 aaKnown RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 SOX14O95416 240 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 OTCP00480 354 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 OPN1SWP03999 348 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 OR12D1P0DN82 309 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 ETFAP13804 333 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 ZNF14P17017 642 aaPredicted RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 HTR2AP28223 471 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 LHX1P48742 406 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 RAB5CP51148 216 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 STC1P52823 247 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 DLX5P56178 289 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 GABREP78334 506 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 HGFACQ04756 655 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 ADIGQ0VDE8 80 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 MTAPQ13126 283 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 IL10RAQ13651 578 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 SLC25A30Q5SVS4 291 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 NCMAPQ5T1S8 102 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 HEPHL1Q6MZM0 1159 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 LIN54Q6MZP7 749 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 ZNF813Q6ZN06 617 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 HFE2Q6ZVN8 426 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 NKAPQ8N5F7 415 aaKnown RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 RTL3Q8N8U3 475 aaKnown RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 RNF149Q8NC42 400 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 GPRC5AQ8NFJ5 357 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 OR5M1Q8NGP8 315 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 EMID1Q96A84 441 aaPredicted RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 ZNF582Q96NG8 517 aaPredicted RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 GPR21Q99679 349 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 RSRP1Q9BUV0 290 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 OPN3Q9H1Y3 402 aaPredicted RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 SUV39H2Q9H5I1 410 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 HRASLSQ9HDD0 168 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 DUSP22Q9NRW4 184 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 SEMA3GQ9NS98 782 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 TAS2R13Q9NYV9 303 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 CPA4Q9UI42 421 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms