RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ADAM10O14672 748 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 EI24O14681 340 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 EIF4E2O60573 245 aaKnown RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 TPST2O60704 377 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 NADKO95544 446 aaPredicted RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 OPN1SWP03999 348 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 H1F0P07305 194 aaKnown RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 COX6A1P12074 109 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 CDH2P19022 906 aaPredicted RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 ITIH1P19827 911 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 CBLP22681 906 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 PTGER1P34995 402 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 FOLR3P41439 243 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 RBM34P42696 430 aaKnown RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 ACAA2P42765 397 aaKnown RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 TMED10P49755 219 aaKnown RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 PGDP52209 483 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 AQP4P55087 323 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 NRG3P56975 720 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 TEKQ02763 1124 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 PLAURQ03405 335 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 ST3GAL3Q11203 375 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 SNTA1Q13424 505 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 NPTX1Q15818 432 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 FLYWCH1Q4VC44 716 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 MRPL2Q5T653 305 aaKnown RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 TTC23Q5W5X9 447 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 HLA-DQA1Q5Y7H0 255 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 JMJD6Q6NYC1 403 aaPredicted RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 KIRREL2Q6UWL6 708 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 ZNF836Q6ZNA1 936 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 COMTD1Q86VU5 262 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 RANBP3LQ86VV4 465 aaPredicted RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 CHERPQ8IWX8 916 aaKnown RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 NLGN4XQ8N0W4 816 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 TAGAPQ8N103 731 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 SLC43A2Q8N370 569 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 GALNT6Q8NCL4 622 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 NLGN4YQ8NFZ3 816 aaPredicted RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 OR11G2Q8NGC1 345 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 OR4D11Q8NGI4 311 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 ADAMTS17Q8TE56 1095 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 GIPC3Q8TF64 312 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 FBLIM1Q8WUP2 373 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 PMEPA1Q969W9 287 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 ARSGQ96EG1 525 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 RMND5BQ96G75 393 aaPredicted RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 HS6ST2Q96MM7 605 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 TACO1Q9BSH4 297 aaKnown RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 YIPF2Q9BWQ6 316 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 GABARAPL3Q9BY60 117 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 SEMA6AQ9H2E6 1030 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 AKIRIN1Q9H9L7 192 aaPredicted RBP10.03□□□□□ -0.8
PABPN1-203ENST00000553960 MAN2C1Q9NTJ4 1040 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 VNN3Q9NY84 501 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 MYOTQ9UBF9 498 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 SLC13A4Q9UKG4 626 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 MKLN1Q9UL63 735 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 MGAT4BQ9UQ53 548 aa10.03□□□□□ -0.8
PABPN1-203ENST00000553960 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.02□□□□□ -0.81
PABPN1-203ENST00000553960 SH3PXD2BA1X283 911 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 FAM149AA5PLN7 773 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 TRAPPC13A5PLN9 417 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 ANKRD33BA6NCL7 494 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 STMND1H3BQB6 276 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 TNFRSF11BO00300 401 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 FADS1O60427 444 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 PPM1BO75688 479 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 GADD45GO95257 159 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 HPP00738 406 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 FBXO45P0C2W1 286 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 MYF6P23409 242 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 ABCD3P28288 659 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 RRM2P31350 389 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 RYKP34925 604 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 SOX11P35716 441 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 OR1E2P47887 323 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 SLC6A8P48029 635 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 MAP2K6P52564 334 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 SUMO3P55854 103 aaPredicted RBP10.02□□□□□ -0.81
PABPN1-203ENST00000553960 ESRRGP62508 458 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 RPS15P62841 145 aaKnown RBP10.02□□□□□ -0.81
PABPN1-203ENST00000553960 ALDH6A1Q02252 535 aaKnown RBP10.02□□□□□ -0.81
PABPN1-203ENST00000553960 MERTKQ12866 999 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 MED21Q13503 144 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 KEAP1Q14145 624 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 TRAM2Q15035 370 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 ENTPD8Q5MY95 495 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 C1orf94Q6P1W5 598 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 TBPL2Q6SJ96 375 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 LYPD8Q6UX82 237 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 ASCL5Q7RTU5 278 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 TMEM179BQ7Z7N9 219 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 STK32CQ86UX6 486 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 VRK2Q86Y07 508 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 GPALPP1Q8IXQ4 340 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 CLIP4Q8N3C7 705 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 CLDN22Q8N7P3 220 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 DEFB124Q8NES8 71 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms