RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FHP07954 510 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 UBTFL6P0CB48 400 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 ADORA3P0DMS8 318 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 EIF2S2P20042 333 aaKnown RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 PTNP21246 168 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CD9P21926 228 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CD1BP29016 333 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 HSD17B2P37059 387 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 HPCAL1P37235 193 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SLC11A1P49279 550 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CCT3P49368 545 aaKnown RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 CCR4P51679 360 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SGSHP51688 502 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 ATP1B3P54709 279 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 HADHBP55084 474 aaKnown RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 BACE1P56817 501 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 DCDC1P59894 354 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 ABCE1P61221 599 aaKnown RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 MRPS6P82932 125 aaKnown RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 EWSR1Q01844 656 aaKnown RBP eCLIP1.93□□□□□ -2.1
SRP54-204ENST00000553923 NAAAQ02083 359 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 BDH1Q02338 343 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CSTF1Q05048 431 aaKnown RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 BNIP1Q12981 228 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 DRP2Q13474 957 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 PEX6Q13608 980 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 GRB14Q14449 540 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 TGFBIQ15582 683 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 EXT1Q16394 746 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 DUSP5Q16690 384 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 TMEM44Q2T9K0 475 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CTSL3PQ5NE16 218 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 AGBL2Q5U5Z8 902 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 OR4F3Q6IEY1 312 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 TMEM107Q6UX40 140 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 Q6ZR54 194 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 LANCL3Q6ZV70 420 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 G2E3Q7L622 706 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 VTCN1Q7Z7D3 282 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SERINC5Q86VE9 423 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SERPINA9Q86WD7 417 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CACUL1Q86Y37 369 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 PLD3Q8IV08 490 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 GPC2Q8N158 579 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 ZNF843Q8N446 348 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 MAPKAPK5-AS1Q8N8E1 139 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 FAM83FQ8NEG4 500 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 OR4F17Q8NGA8 305 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 OR4D5Q8NGN0 318 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 OR4F5Q8NH21 305 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 OR8K3Q8NH51 312 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CNIH3Q8TBE1 160 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 M1APQ8TC57 530 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 ST8SIA1Q92185 356 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SUSD6Q92537 303 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 P3H4Q92791 437 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 MYLPFQ96A32 169 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 C18orf25Q96B23 403 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 SLC25A36Q96CQ1 311 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 HAVCR1Q96D42 359 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 C11orf24Q96F05 449 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 SLC47A1Q96FL8 570 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SDSLQ96GA7 329 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 TIMD4Q96H15 378 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 OR4F4Q96R69 305 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 PANX2Q96RD6 677 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CCM2Q9BSQ5 444 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 DPH7Q9BTV6 452 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 ST6GALNAC5Q9BVH7 336 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 RAB11FIP5Q9BXF6 653 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 FGFBP2Q9BYJ0 223 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 STRADBQ9C0K7 418 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SLC7A5P2Q9GIP4 190 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 GLT8D2Q9H1C3 349 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 POLR3FQ9H1D9 316 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 BLZF1Q9H2G9 400 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 ALG9Q9H6U8 611 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 DCTPP1Q9H773 170 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SUDS3Q9H7L9 328 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 IL1RL2Q9HB29 575 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SLC17A5Q9NRA2 495 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 PNO1Q9NRX1 252 aaKnown RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 PLCXD1Q9NUJ7 323 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 TEX10Q9NXF1 929 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 GPR83Q9NYM4 423 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 MIS18AQ9NYP9 233 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 UBAP1Q9NZ09 502 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 AHSPQ9NZD4 102 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 FBXL4Q9UKA2 621 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 PITPNC1Q9UKF7 332 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 EMCNQ9ULC0 261 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 PRPF19Q9UMS4 504 aaKnown RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 GSTK1Q9Y2Q3 226 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 KLHDC2Q9Y2U9 406 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 KANK1Q14678 1352 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CCDC7Q96M83 1385 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 PLEKHG2Q9H7P9 1386 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CUX2O14529 1486 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 UMODL1Q5DID0 1318 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 IGLV7-46A0A075B6I9 117 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms