RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 RASSF2P50749 326 aa16.51■□□□□ 0.23
PSEN1-208ENST00000553719 RPP38P78345 283 aaKnown RBP16.51■□□□□ 0.23
PSEN1-208ENST00000553719 GPR68Q15743 365 aa16.51■□□□□ 0.23
PSEN1-208ENST00000553719 SLC25A25Q6KCM7 469 aa16.51■□□□□ 0.23
PSEN1-208ENST00000553719 IFNEQ86WN2 208 aa16.51■□□□□ 0.23
PSEN1-208ENST00000553719 FAM156AQ8NDB6 213 aa16.51■□□□□ 0.23
PSEN1-208ENST00000553719 KCTD14Q9BQ13 255 aaPredicted RBP16.51■□□□□ 0.23
PSEN1-208ENST00000553719 SACM1LQ9NTJ5 587 aa16.51■□□□□ 0.23
PSEN1-208ENST00000553719 CHST2Q9Y4C5 530 aa16.51■□□□□ 0.23
PSEN1-208ENST00000553719 HRH3Q9Y5N1 445 aa16.51■□□□□ 0.23
PSEN1-208ENST00000553719 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.51■□□□□ 0.23
PSEN1-208ENST00000553719 C5orf58C9J3I9 102 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 GSC2O15499 205 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 DNAJC8O75937 253 aaPredicted RBP16.5■□□□□ 0.23
PSEN1-208ENST00000553719 SORBS2O94875 1100 aaKnown RBP16.5■□□□□ 0.23
PSEN1-208ENST00000553719 GGT1P19440 569 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 ADH7P40394 386 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 CD226Q15762 336 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 ZNF766Q5HY98 468 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 TBCELQ5QJ74 424 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 PDZK1Q5T2W1 519 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 PRAMEF20Q5VT98 475 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 SLC30A6Q6NXT4 461 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 FAM71CQ8NEG0 241 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 CLPTM1LQ96KA5 538 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 OSBPL11Q9BXB4 747 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.5■□□□□ 0.23
PSEN1-208ENST00000553719 GALNT9Q9HCQ5 603 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 ZNF71Q9NQZ8 489 aaPredicted RBP16.5■□□□□ 0.23
PSEN1-208ENST00000553719 DTNAQ9Y4J8 743 aa16.5■□□□□ 0.23
PSEN1-208ENST00000553719 SMG1Q96Q15 3661 aaKnown RBP16.49■□□□□ 0.23
PSEN1-208ENST00000553719 C17orf51A8MQB3 221 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 TMEM229AB2RXF0 380 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 TRIM3O75382 744 aaPredicted RBP16.49■□□□□ 0.23
PSEN1-208ENST00000553719 DBIP07108 87 aaKnown RBP16.49■□□□□ 0.23
PSEN1-208ENST00000553719 THBS1P07996 1170 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 CD46P15529 392 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 AQP1P29972 269 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 FOXO1Q12778 655 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 FGFBP1Q14512 234 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 ZNF169Q14929 603 aaPredicted RBP16.49■□□□□ 0.23
PSEN1-208ENST00000553719 INTS11Q5TA45 600 aaKnown RBP16.49■□□□□ 0.23
PSEN1-208ENST00000553719 SLC6A19Q695T7 634 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 HMGN2P46Q86SG4 172 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 ZNF527Q8NB42 609 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 TAMM41Q96BW9 452 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 TMEM41AQ96HV5 264 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 C5orf34Q96MH7 638 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 SLC25A18Q9H1K4 315 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 METTL7AQ9H8H3 244 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 LHX6Q9UPM6 363 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 KLF13Q9Y2Y9 288 aaPredicted RBP16.49■□□□□ 0.23
PSEN1-208ENST00000553719 WIF1Q9Y5W5 379 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 ZFYVE26Q68DK2 2539 aa16.49■□□□□ 0.23
PSEN1-208ENST00000553719 IGLV3-32A0A0A0MS00 114 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 PINLYPA6NC86 204 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 SERINC4A6NH21 518 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 LRRC3CA6NJW4 275 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 CXCR6O00574 342 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 SCDO00767 359 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 PDE5AO76074 875 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 MFN2O95140 757 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 ANGPTL1O95841 491 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 P04436 131 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 PABPC4LP0CB38 370 aaKnown RBP16.48■□□□□ 0.23
PSEN1-208ENST00000553719 NID1P14543 1247 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 CNR1P21554 472 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 DNASE1L1P49184 302 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 EEF1A1P68104 462 aaKnown RBP16.48■□□□□ 0.23
PSEN1-208ENST00000553719 DMTNQ08495 405 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 RNF220Q5VTB9 566 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 ZNF836Q6ZNA1 936 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 GALNTL5Q7Z4T8 443 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 PATL1Q86TB9 770 aaKnown RBP16.48■□□□□ 0.23
PSEN1-208ENST00000553719 MARCH3Q86UD3 253 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 VRK2Q86Y07 508 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 SULF2Q8IWU5 870 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 TMEM178AQ8NBL3 297 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 TNIP2Q8NFZ5 429 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 OR2M7Q8NG81 312 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 OR52P1PQ8NH57 321 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 PNPLA2Q96AD5 504 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 THTPAQ9BU02 230 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 TBL1XR1Q9BZK7 514 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 KLRF1Q9NZS2 232 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 ZNF443Q9Y2A4 671 aaPredicted RBP16.48■□□□□ 0.23
PSEN1-208ENST00000553719 B3GNT3Q9Y2A9 372 aa16.48■□□□□ 0.23
PSEN1-208ENST00000553719 CLDN24A6NM45 220 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 G3V3Y1 287 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 M0QX08 132 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 SNPHO15079 494 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 SCO2O43819 266 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 PEX1O43933 1283 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 BCAS1O75363 584 aaPredicted RBP16.47■□□□□ 0.23
PSEN1-208ENST00000553719 PDE9AO76083 593 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 SNX4O95219 450 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 EPPINO95925 133 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 SFTPCP11686 197 aa16.47■□□□□ 0.23
PSEN1-208ENST00000553719 TCN1P20061 433 aaPredicted RBP16.47■□□□□ 0.23
PSEN1-208ENST00000553719 CD247P20963 164 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms