RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CRB2Q5IJ48 1285 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 FHL5Q5TD97 284 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 IRAK1BP1Q5VVH5 260 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 MFSD12Q6NUT3 480 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 TNFAIP8L2Q6P589 184 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 FAM199XQ6PEV8 388 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 TMEM205Q6UW68 189 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 COX15Q7KZN9 410 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 EIF3MQ7L2H7 374 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ANKRD37Q7Z713 158 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 STK32CQ86UX6 486 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 RAB43Q86YS6 212 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 CCDC103Q8IW40 242 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 KBTBD2Q8IY47 623 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PEX5LQ8IYB4 626 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ZZZ3Q8IYH5 903 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PRSS58Q8IYP2 241 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 HORMAD2Q8N7B1 307 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 COX18Q8N8Q8 333 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 B3GNT7Q8NFL0 401 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OR7G2Q8NG99 324 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OR52R1Q8NGF1 315 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OR1N1Q8NGS0 311 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OR2Y1Q8NGV0 311 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OR8K3Q8NH51 312 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 BBS10Q8TAM1 723 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 M1APQ8TC57 530 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PNPT1Q8TCS8 783 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SPPL2AQ8TCT8 520 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SLC2A12Q8TD20 617 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 GPR151Q8TDV0 419 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PTPMT1Q8WUK0 201 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OIT3Q8WWZ8 545 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 KIAA1143Q96AT1 154 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SLC35A4Q96G79 324 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 VMP1Q96GC9 406 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PYURFQ96I23 114 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 FBXL20Q96IG2 436 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 TRNT1Q96Q11 434 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OR7D2Q96RA2 312 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 LMF2Q9BU23 707 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 CNPPD1Q9BV87 410 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 BTBD2Q9BX70 525 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 TRIM4Q9C037 500 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OR8D2Q9GZM6 311 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 HOXD1Q9GZZ0 328 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PCDHAC1Q9H158 963 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 DENND2DQ9H6A0 471 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 MAGIXQ9H6Y5 334 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 BCL2L10Q9HD36 194 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 THSD1Q9NS62 852 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SLC22A11Q9NSA0 550 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SLC6A13Q9NSD5 602 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 CCM2LQ9NUG4 571 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 DCAF13Q9NV06 445 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 KLHL28Q9NXS3 571 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 TMEFF2Q9UIK5 374 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ANAPC2Q9UJX6 822 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SLC13A4Q9UKG4 626 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PACSIN3Q9UKS6 424 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ERVK-11Q9UQG0 969 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ERVK-19Q9WJR5 959 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PTRH2Q9Y3E5 179 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OR10H1Q9Y4A9 318 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 AP4S1Q9Y587 144 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 HEMK1Q9Y5R4 338 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 OTOGLQ3ZCN5 2332 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 LOC102723996A0A087X1L8 192 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 NSG1A0A0A6YYJ2 146 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 C2orf92A0A1B0GVN3 265 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 TCRBV3S1A0A5B6 114 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 DHRS12A0PJE2 317 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SAGE2PA6NJ88 616 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 GNGT2O14610 69 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ACOX3O15254 700 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 HS6ST1O60243 411 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ZFAND5O76080 213 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 PGM3O95394 542 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 BAG2O95816 211 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 PLATP00750 562 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SERPINA1P01009 418 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ALPPP05187 535 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 BCHEP06276 602 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 CT62P0C5K7 136 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 RAP2AP10114 183 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 IL7RP16871 459 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 NAGAP17050 411 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 FASP25445 335 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 MSX2P35548 267 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 DLSTP36957 453 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 MAN2A2P49641 1150 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 CLK3P49761 638 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 EMDP50402 254 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 MVDP53602 400 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 PNLIPRP2P54317 469 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SLC37A1P57057 533 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SMIM11AP58511 58 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 RPP38P78345 283 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 MRPS35P82673 323 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms