RNA–Protein interactions for RNA: ENST00000552017.1

CBX3P5-201, Transcript of chromobox 3 pseudogene 5, humanhuman

BASIC

Gene CBX3P5, Length 521 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P5-201ENST00000552017 HOXC4P09017 264 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 STAG3L1P0CL83 205 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SMIM10L1P0DMW3 83 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CD1EP15812 388 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 ZNF18P17022 549 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 S1PR1P21453 382 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 ZP3P21754 424 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 MMP8P22894 467 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 MARK3P27448 753 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 GNRHRP30968 328 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 HNRNPH3P31942 346 aaKnown RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CCKARP32238 428 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 DDOSTP39656 456 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 RFC3P40938 356 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 GRIA1P42261 906 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 FRKP42685 505 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 NRIP1P48552 1158 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 MRPL19P49406 292 aaKnown RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CSNK1EP49674 416 aaKnown RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 THBS3P49746 956 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 HTR6P50406 440 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 RAB28P51157 221 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 NR0B1P51843 470 aaKnown RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CDH8P55286 799 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 NANOS2P60321 138 aaKnown RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 RPS20P60866 119 aaKnown RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 ERVS71-1P61550 626 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 NCALDP61601 193 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 COPZ1P61923 177 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 GNG11P61952 73 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 MYL7Q01449 175 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SEMG2Q02383 582 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CFHR3Q02985 330 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 TLE4Q04727 773 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 RBBP4Q09028 425 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SEMA3BQ13214 749 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 BAATQ14032 418 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 MTF1Q14872 753 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 IRF4Q15306 451 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 P2RY14Q15391 338 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SPA17Q15506 151 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SLC9A3R2Q15599 337 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 TRIP13Q15645 432 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 INPP5JQ15735 1006 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CHI3L2Q15782 390 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 TAZQ16635 292 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 DUSP6Q16828 381 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 EXOC3L4Q17RC7 722 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 C18orf21Q32NC0 220 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 GPR33Q49SQ1 333 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 PTPN20Q4JDL3 420 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 IFI44LQ53G44 452 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 PDLIM3Q53GG5 364 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 PIGGQ5H8A4 983 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 C9orf64Q5T6V5 341 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 WBP2NLQ6ICG8 309 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 NANOGP8Q6NSW7 305 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 FAHD2BQ6P2I3 314 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 UGT2A3Q6UWM9 527 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 DLK2Q6UY11 383 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 KYAT3Q6YP21 454 aaKnown RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 C9orf47Q6ZRZ4 202 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 RNF44Q7L0R7 432 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 MEPCEQ7L2J0 689 aaKnown RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CUZD1Q86UP6 607 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 PIM3Q86V86 326 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CATSPERDQ86XM0 798 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 PRSS58Q8IYP2 241 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 ZNF34Q8IZ26 560 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 EID3Q8N140 333 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 GPC2Q8N158 579 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CCNYQ8ND76 341 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 OR2M7Q8NG81 312 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 OR52H1Q8NGJ2 320 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 OR52E1Q8NGJ3 308 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 COQ8AQ8NI60 647 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 LNX1Q8TBB1 728 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 KCNG4Q8TDN1 519 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CXorf40AQ8TE69 158 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 WIPF2Q8TF74 440 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SLC22A17Q8WUG5 538 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SFT2D1Q8WV19 159 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 ASB5Q8WWX0 329 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 ARNTL2Q8WYA1 636 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SEMA4DQ92854 862 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SLC38A4Q969I6 547 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 ZNF707Q96C28 371 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 LRRC46Q96FV0 321 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 FAHD2AQ96GK7 314 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 PRR11Q96HE9 360 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SMIM10Q96HG1 83 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SLC45A3Q96JT2 553 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 MARK4Q96L34 752 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 NOL4LQ96MY1 436 aaPredicted RBP3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 SPATA13Q96N96 652 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 NECTIN4Q96NY8 510 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 FIZ1Q96SL8 496 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 MAP3K3Q99759 626 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 CMKLR1Q99788 373 aa3.79□□□□□ -1.8
CBX3P5-201ENST00000552017 PRMT1Q99873 361 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms