RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 ZCCHC12Q6PEW1 402 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 CD164L2Q6UWJ8 174 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 C1orf186Q6ZWK4 172 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 SLC16A9Q7RTY1 509 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 GPR141Q7Z602 305 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 SCD5Q86SK9 330 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 SYVN1Q86TM6 617 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 TRIM69Q86WT6 500 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 ZGRF1Q86YA3 2104 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 LAX1Q8IWV1 398 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 TMEM86AQ8N2M4 240 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 MUC20Q8N307 709 aaPredicted RBP3.39□□□□□ -1.87
LIMA1-208ENST00000551691 FBXW8Q8N3Y1 598 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 OR10Q1Q8NGQ4 319 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 OR13C3Q8NGS6 347 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 HAS2Q92819 552 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 NAT6Q93015 286 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 TMA16Q96EY4 203 aaKnown RBP3.39□□□□□ -1.87
LIMA1-208ENST00000551691 LMLNQ96KR4 655 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 ZNF385AQ96PM9 386 aaKnown RBP3.39□□□□□ -1.87
LIMA1-208ENST00000551691 BTBD9Q96Q07 612 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 TXN2Q99757 166 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 TMEM121Q9BTD3 319 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 LRRC61Q9BV99 259 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 ZNF416Q9BWM5 594 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 Q9H8V8 135 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 MARCH7Q9H992 704 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 UBTD1Q9HAC8 227 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 TCF7L2Q9NQB0 619 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 CENPMQ9NSP4 180 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 PIGVQ9NUD9 493 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 DDX19AQ9NUU7 478 aaKnown RBP3.39□□□□□ -1.87
LIMA1-208ENST00000551691 EXOC1Q9NV70 894 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 PANK4Q9NVE7 773 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 GDAP2Q9NXN4 497 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 TMEM9Q9P0T7 183 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 SCML1Q9UN30 329 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 STUB1Q9UNE7 303 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 ERVW-1Q9UQF0 538 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 CHMP2BQ9UQN3 213 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 ERVK-19Q9WJR5 959 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 PLEKHA6Q9Y2H5 1048 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 ANGPTL3Q9Y5C1 460 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 ZANQ9Y493 2812 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 SVEP1Q4LDE5 3571 aa3.39□□□□□ -1.87
LIMA1-208ENST00000551691 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 FAM92AA1XBS5 289 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 GOLGA8IPA6NC78 632 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 ARGFXA6NJG6 315 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 GOLGA8JA6NMD2 632 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 C2orf81A6NN90 581 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 HNRNPCL2B2RXH8 293 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 LMO7DNF2Z398 122 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 SOCS2O14508 198 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 TBL1XO60907 577 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 PCCBP05166 539 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 DLATP10515 647 aaKnown RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 GCFC2P16383 781 aaKnown RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 ITGA2P17301 1181 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 HNRNPA2B1P22626 353 aaKnown RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 PSMA5P28066 241 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 ALDH4A1P30038 563 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 AKT2P31751 481 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 DLSTP36957 453 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 CCT6AP40227 531 aaKnown RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 OR3A1P47881 315 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 GLIPR1P48060 266 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 THOP1P52888 689 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 CLDN17P56750 224 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 MAP3K7CLP57077 242 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 GCNT1Q02742 428 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 RELQ04864 619 aaPredicted RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 SLC20A2Q08357 652 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 NME3Q13232 169 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 ODF3L2Q3SX64 289 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 LRRC23Q53EV4 343 aaPredicted RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 SLC35D3Q5M8T2 416 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 MEX3BQ6ZN04 569 aaKnown RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 PIWIL4Q7Z3Z4 852 aaKnown RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 KCNMB4Q86W47 210 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 MISPQ8IVT2 679 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 STHQ8IWL8 128 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 CD302Q8IX05 232 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 EID3Q8N140 333 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 KLHDC1Q8N7A1 406 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 PRR26Q8N8Z3 221 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 LMNTD1Q8N9Z9 388 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 FDCSPQ8NFU4 85 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 OR56B1Q8NGI3 324 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 FGFBP3Q8TAT2 258 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 KIAA1143Q96AT1 154 aaPredicted RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 SLCO4A1Q96BD0 722 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 RTP4Q96DX8 246 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 SCMH1Q96GD3 660 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 RBM18Q96H35 190 aaKnown RBP3.38□□□□□ -1.87
LIMA1-208ENST00000551691 HPDLQ96IR7 371 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 EPSTI1Q96J88 318 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 ADGRG7Q96K78 797 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 PLIN2Q99541 437 aa3.38□□□□□ -1.87
LIMA1-208ENST00000551691 ASCL2Q99929 193 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms