RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PACS1Q6VY07 963 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CYHR1Q6ZMK1 362 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 GALNTL5Q7Z4T8 443 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 VN1R4Q7Z5H5 301 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ADCK2Q7Z695 626 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 GLCCI1Q86VQ1 547 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 AMZ2Q86W34 360 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 TGIF2LYQ8IUE0 185 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 MAP7D3Q8IWC1 876 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 RNF113BQ8IZP6 322 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF567Q8N184 647 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CLDN19Q8N6F1 224 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 NKAIN3Q8N8D7 197 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SIDT2Q8NBJ9 832 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 RBM15BQ8NDT2 890 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ACVR1CQ8NER5 493 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 NFAM1Q8NET5 270 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 OR4E2Q8NGC2 313 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 OR5AR1Q8NGP9 310 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 OR13C4Q8NGS5 318 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 LILRB4Q8NHJ6 448 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CFAP61Q8NHU2 1237 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SETD6Q8TBK2 473 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 BRSK1Q8TDC3 778 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PHF10Q8WUB8 498 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ASB5Q8WWX0 329 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 MR1Q95460 341 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PIGTQ969N2 578 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ATP6V1E2Q96A05 226 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 RHBDF1Q96CC6 855 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 TM4SF19Q96DZ7 209 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SPACA9Q96E40 222 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 STAMBPL1Q96FJ0 436 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 MARK4Q96L34 752 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 C3orf30Q96M34 536 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF830Q96NB3 372 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 BIRC8Q96P09 236 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 IP6K3Q96PC2 410 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 MS4A10Q96PG2 267 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SIGLEC12Q96PQ1 595 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CSF3RQ99062 836 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SMR3AQ99954 134 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 FOXC2Q99958 501 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 BPIFA3Q9BQP9 254 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 HGH1Q9BTY7 390 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SPATA16Q9BXB7 569 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 HES7Q9BYE0 225 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 P2RY12Q9H244 342 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PPIL3Q9H2H8 161 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 LRMDAQ9H2I8 198 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 TRABDQ9H4I3 376 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 XKR8Q9H6D3 395 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 OPA3Q9H6K4 179 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SUDS3Q9H7L9 328 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 C10orf88Q9H8K7 445 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PLEKHF2Q9H8W4 249 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 COG4Q9H9E3 785 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 GRPEL1Q9HAV7 217 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PROK2Q9HC23 129 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SH2D2AQ9NP31 389 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 NOX4Q9NPH5 578 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 EURLQ9NYK6 297 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SELENONQ9NZV5 590 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 TRIM10Q9UDY6 481 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF223Q9UK11 482 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 DNPEPQ9ULA0 475 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PSMD13Q9UNM6 376 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 B3GALT5Q9Y2C3 310 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 WBP11Q9Y2W2 641 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ATP6V1DQ9Y5K8 247 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 FAM215AQ9Y5M1 114 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 NFS1Q9Y697 457 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CACNA1CQ13936 2221 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 KMT2CQ8NEZ4 4911 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 GTF3C1Q12789 2109 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 HIVEP2P31629 2446 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ROS1P08922 2347 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 hCG_1818297A0A087WSY0 165 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 IGLV5-52A0A0A0MRZ9 124 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 A0A1B0GUH1 482 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 C5orf60A6NFR6 353 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 B4DXG7 233 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 C4orf51C9J302 202 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PRSS44E7EML9 344 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 E7EQ34 232 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CCL22O00626 93 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 P2RX6O15547 441 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ZW10O43264 779 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 OR1I1O60431 355 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SLC19A2O60779 497 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CTAG2O75638 210 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 GLSO94925 669 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 BMP10O95393 424 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CLDN14O95500 239 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 AP2A1O95782 977 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SERPINA7P05543 415 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 HOXD4P09016 255 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SMIM10L1P0DMW3 83 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ATP1B2P14415 290 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 FERP16591 822 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms