RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PMS2CLQ68D20 193 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 WDR88Q6ZMY6 472 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 MAMSTRQ6ZN01 415 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 MED25Q71SY5 747 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF367Q7RTV3 350 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 SLC46A3Q7Z3Q1 461 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 BCDIN3DQ7Z5W3 292 aaKnown RBP10.66□□□□□ -0.7
RAB5C-208ENST00000551338 WDR5BQ86VZ2 330 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 NRMQ8IXM6 262 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 FAM26EQ8N5C1 309 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 CNOT9Q92600 299 aaKnown RBP10.66□□□□□ -0.7
RAB5C-208ENST00000551338 RBM18Q96H35 190 aaKnown RBP10.66□□□□□ -0.7
RAB5C-208ENST00000551338 SLC41A2Q96JW4 573 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 ELF4Q99607 663 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-208ENST00000551338 CNPPD1Q9BV87 410 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 TSSK6Q9BXA6 273 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 EVA1AQ9H8M9 152 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 TVP23BQ9NYZ1 205 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 MAU2Q9Y6X3 613 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 NPIPB9F8W1W9 429 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 SLC22A1O15245 554 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 FOXD2O60548 495 aaPredicted RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 PDGFBP01127 241 aaPredicted RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 INHBBP09529 407 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 DBTP11182 482 aaKnown RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 GNSP15586 552 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 CD36P16671 472 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 PTNP21246 168 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 DRD5P21918 477 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 GRK5P34947 590 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 OR1D4P47884 311 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 RFX3P48380 749 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 ENTPD1P49961 510 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 SMSP52788 366 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 FGFBP1Q14512 234 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF141Q15928 474 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 TIGD6Q17RP2 521 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 SNAP47Q5SQN1 464 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 SLC25A30Q5SVS4 291 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 PRAMEF17Q5VTA0 474 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 PLAG1Q6DJT9 500 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF620Q6ZNG0 422 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 TTLL10Q6ZVT0 673 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 ARHGAP22Q7Z5H3 698 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 PLXDC1Q8IUK5 500 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 GRAMD2AQ8IUY3 354 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 CACTIN-AS1Q8N1I8 211 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 DEFB123Q8N688 67 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 CLDN22Q8N7P3 220 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF615Q8N8J6 731 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 Q8N9G6 341 aaPredicted RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 ZSCAN1Q8NBB4 408 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 OR4Q3Q8NH05 313 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 C16orf52Q8NHV5 167 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 TMEM163Q8TC26 289 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 RPL3LQ92901 407 aaKnown RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 CCDC74AQ96AQ1 378 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 ARSGQ96EG1 525 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 MVB12AQ96EY5 273 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 CRELD1Q96HD1 420 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 Q96MT0 163 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF578Q96N58 590 aaPredicted RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 OR10A5Q9H207 317 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 PRMT8Q9NR22 394 aaPredicted RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 TBC1D23Q9NUY8 699 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 DNAJB12Q9NXW2 375 aaKnown RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 DHCR7Q9UBM7 475 aaKnown RBP10.65□□□□□ -0.7
RAB5C-208ENST00000551338 MMACHCQ9Y4U1 282 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 CACNA1EQ15878 2313 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 CPAMD8Q8IZJ3 1885 aa10.65□□□□□ -0.7
RAB5C-208ENST00000551338 IGKV3D-11A0A0A0MRZ8 115 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 LY6G6EA0A0G2JKS1 128 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 A0A1B0GTQ1 180 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 TTC36A6NLP5 189 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 CDC42EP2O14613 210 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 DSCR3O14972 297 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 IFNA16P05015 189 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 CT45A8P0DMV1 189 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 CT45A9P0DMV2 189 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 FOLR1P15328 257 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 ACAA2P42765 397 aaKnown RBP10.64□□□□□ -0.71
RAB5C-208ENST00000551338 ARL4DP49703 201 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 PGDP52209 483 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 EFNA3P52797 238 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 GAS1P54826 345 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 NCS1P62166 190 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 LSM3P62310 102 aaKnown RBP10.64□□□□□ -0.71
RAB5C-208ENST00000551338 NNATQ16517 81 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 SYT14P1Q58G82 188 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 CT45A2Q5DJT8 189 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 SLC27A4Q6P1M0 643 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 RRM2BQ7LG56 351 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 ZBTB46Q86UZ6 589 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 KMT5CQ86Y97 462 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 GATAD2AQ86YP4 633 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF614Q8N883 585 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 RCBTB1Q8NDN9 531 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 PFN4Q8NHR9 129 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 WDR36Q8NI36 951 aaKnown RBP10.64□□□□□ -0.71
RAB5C-208ENST00000551338 NDNFQ8TB73 568 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms