RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CDC14CA4D256 554 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 ZAR1LA6NP61 321 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 EFCAB7A8K855 629 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 NPIPB9F8W1W9 429 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 PIP5K1CO60331 668 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 CNOT3O75175 753 aaKnown RBP18.19■□□□□ 0.5
SSH1-209ENST00000551165 ZGLP1P0C6A0 271 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 CCL4P13236 92 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 ST3GAL3Q11203 375 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 NEDD8Q15843 81 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 FAM69BQ5VUD6 431 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 OR7G1Q8NGA0 311 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 SLC38A4Q969I6 547 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 POLR1BQ9H9Y6 1135 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 AMBNQ9NP70 447 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 C11orf16Q9NQ32 467 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 RXFP3Q9NSD7 469 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 ZNF28P17035 718 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 RPS6KA3P51812 740 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 BIKQ13323 160 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 ZNF385CQ66K41 422 aaPredicted RBP18.18■□□□□ 0.5
SSH1-209ENST00000551165 C1orf94Q6P1W5 598 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 PPP1R3BQ86XI6 285 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 PRR22Q8IZ63 422 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 YIPF3Q9GZM5 350 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 ERVK-18Q9QC07 812 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 PRODH2Q9UF12 536 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 H3BN98 237 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 DRD5P21918 477 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 DUSP3P51452 185 aaPredicted RBP18.18■□□□□ 0.5
SSH1-209ENST00000551165 OR1Q1Q15612 314 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 ZNF730Q6ZMV8 503 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 C9orf40Q8IXQ3 194 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 SPARTQ8N0X7 666 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 IQCF1Q8N6M8 205 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 RHOXF1Q8NHV9 184 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 RHBDD1Q8TEB9 315 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 FAM46AQ96IP4 442 aaKnown RBP18.18■□□□□ 0.5
SSH1-209ENST00000551165 GAL3ST4Q96RP7 486 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 PRSS27Q9BQR3 290 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 DSN1Q9H410 356 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 KIF26BQ2KJY2 2108 aa18.18■□□□□ 0.5
SSH1-209ENST00000551165 LYPD3O95274 346 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 LDOC1O95751 146 aaPredicted RBP18.17■□□□□ 0.5
SSH1-209ENST00000551165 GABRB1P18505 474 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 RORAP35398 523 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 NUP107P57740 925 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 ESRRGP62508 458 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 ZFP36L1Q07352 338 aaKnown RBP18.17■□□□□ 0.5
SSH1-209ENST00000551165 CNPY1Q3B7I2 92 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 PLA2G2CQ5R387 149 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 XAF1Q6GPH4 301 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 BMP8AQ7Z5Y6 402 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 KIF18BQ86Y91 864 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 ZNF566Q969W8 418 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 ADIPOR1Q96A54 375 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 LIN28AQ9H9Z2 209 aaKnown RBP18.17■□□□□ 0.5
SSH1-209ENST00000551165 DNAJB12Q9NXW2 375 aaKnown RBP18.17■□□□□ 0.5
SSH1-209ENST00000551165 IGLV3-12A0A075B6K2 115 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 OR5F1O95221 314 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 CCDC159P0C7I6 412 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 GRK6P43250 576 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 OMPP47874 163 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 NUDT6P53370 316 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 ILKQ13418 452 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 SF3A2Q15428 464 aaKnown RBP18.17■□□□□ 0.5
SSH1-209ENST00000551165 DBX2Q6ZNG2 339 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 RANBP3LQ86VV4 465 aaPredicted RBP18.17■□□□□ 0.5
SSH1-209ENST00000551165 APLFQ8IW19 511 aaPredicted RBP18.17■□□□□ 0.5
SSH1-209ENST00000551165 BMPERQ8N8U9 685 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 PLA2G12AQ9BZM1 189 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 TGIF2Q9GZN2 237 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 CEPT1Q9Y6K0 416 aa18.17■□□□□ 0.5
SSH1-209ENST00000551165 SMIM31A0A1B0GVY4 71 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 IDSB3KWA1 339 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 CSTF2P33240 577 aaKnown RBP eCLIP18.16■□□□□ 0.5
SSH1-209ENST00000551165 DCDP81605 110 aaKnown RBP18.16■□□□□ 0.5
SSH1-209ENST00000551165 ZNF141Q15928 474 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 BROXQ5VW32 411 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 NRMQ8IXM6 262 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 PLPP5Q8NEB5 264 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 RNF217Q8TC41 542 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 SLC46A1Q96NT5 459 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 CCDC90BQ9GZT6 254 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 EGLN3Q9H6Z9 239 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 ABCB7O75027 752 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 SOX30O94993 753 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 ACAA2P42765 397 aaKnown RBP18.16■□□□□ 0.5
SSH1-209ENST00000551165 PPICP45877 212 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 GPR4P46093 362 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 ATP12AP54707 1039 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 OCA2Q04671 838 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 TOP3AQ13472 1001 aaPredicted RBP18.16■□□□□ 0.5
SSH1-209ENST00000551165 CCDC157Q569K6 752 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 GATSQ8NAP1 163 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 ACOT11Q8WXI4 607 aaPredicted RBP18.16■□□□□ 0.5
SSH1-209ENST00000551165 PMM1Q92871 262 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 G6PC3Q9BUM1 346 aa18.16■□□□□ 0.5
SSH1-209ENST00000551165 CCDC160A6NGH7 325 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 FAM20BO75063 409 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms