RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 RPS4Y1P22090 263 aaKnown RBP19.4■□□□□ 0.7
PRDM4-205ENST00000550376 GPR3P46089 330 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 COX10Q12887 443 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 MED22Q15528 200 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 TCTE1Q5JU00 501 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 PAQR6Q6TCH4 344 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 SHISA6Q6ZSJ9 500 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 TBC1D15Q8TC07 691 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 ACOT11Q8WXI4 607 aaPredicted RBP19.4■□□□□ 0.7
PRDM4-205ENST00000550376 PRSS27Q9BQR3 290 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 RNF167Q9H6Y7 350 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 EPHA6Q9UF33 1036 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 SATB2Q9UPW6 733 aa19.4■□□□□ 0.7
PRDM4-205ENST00000550376 CT45A8P0DMV1 189 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 CT45A9P0DMV2 189 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 GRK5P34947 590 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 PCYT1AP49585 367 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 DYNC1I2Q13409 638 aaKnown RBP19.39■□□□□ 0.7
PRDM4-205ENST00000550376 CT45A2Q5DJT8 189 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 UBE2UQ5VVX9 321 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 LYSMD4Q5XG99 296 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 PIGXQ8TBF5 258 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 GNPDA2Q8TDQ7 276 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 CCDC74AQ96AQ1 378 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 ITPAQ9BY32 194 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 OR10A5Q9H207 317 aa19.39■□□□□ 0.7
PRDM4-205ENST00000550376 THBS1P07996 1170 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 IFNA8P32881 189 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 CDK5Q00535 292 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 CD300LDQ6UXZ3 194 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 LAPTM4BQ86VI4 370 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 OR4C3Q8NH37 302 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 WDR36Q8NI36 951 aaKnown RBP19.39■□□□□ 0.69
PRDM4-205ENST00000550376 DPH1Q9BZG8 443 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 ENKD1Q9H0I2 346 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 SLC25A19Q9HC21 320 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 C17orf105B2RV13 164 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 DUX1O43812 170 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 COQ9O75208 318 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 SLC2A10O95528 541 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 SNRPGP62308 76 aaKnown RBP19.39■□□□□ 0.69
PRDM4-205ENST00000550376 SKP1P63208 163 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 TSPAN31Q12999 210 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 ZNHIT3Q15649 155 aaPredicted RBP19.39■□□□□ 0.69
PRDM4-205ENST00000550376 DESI1Q6ICB0 168 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 ZCCHC12Q6PEW1 402 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 PLXDC1Q8IUK5 500 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 SDR16C5Q8N3Y7 309 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 OR8J1Q8NGP2 316 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 TSSK6Q9BXA6 273 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 LANCL2Q9NS86 450 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 OR10H1Q9Y4A9 318 aa19.39■□□□□ 0.69
PRDM4-205ENST00000550376 GABARAPO95166 117 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 DECR1Q16698 335 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 GARNL3Q5VVW2 1013 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 SHFQ7M4L6 423 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 RANBP3LQ86VV4 465 aaPredicted RBP19.38■□□□□ 0.69
PRDM4-205ENST00000550376 UBALD2Q8IYN6 164 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 GATSQ8NAP1 163 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 TEX47Q8TBZ9 253 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 PIGKQ92643 395 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 EFHD2Q96C19 240 aaPredicted RBP19.38■□□□□ 0.69
PRDM4-205ENST00000550376 FLRT3Q9NZU0 649 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 FITM1A5D6W6 292 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 MPZL2O60487 215 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 OR5F1O95221 314 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 GADD45AP24522 165 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 EPHA4P54764 986 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 ZNF91Q05481 1191 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 TBCEQ15813 527 aaPredicted RBP19.38■□□□□ 0.69
PRDM4-205ENST00000550376 EIPR1Q53HC9 387 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 SYT14P1Q58G82 188 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 PLAG1Q6DJT9 500 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 PRR23CQ6ZRP0 262 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 MBOAT2Q6ZWT7 520 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 OR4Q3Q8NH05 313 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 SENP5Q96HI0 755 aaPredicted RBP19.38■□□□□ 0.69
PRDM4-205ENST00000550376 MESP1Q9BRJ9 268 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 OR8D2Q9GZM6 311 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 SYNDIG1Q9H7V2 258 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 TIMMDC1Q9NPL8 285 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 CARD8Q9Y2G2 431 aa19.38■□□□□ 0.69
PRDM4-205ENST00000550376 TP53BP1Q12888 1972 aaPredicted RBP19.37■□□□□ 0.69
PRDM4-205ENST00000550376 MAKP20794 623 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 SLC15A1P46059 708 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 ARRB1P49407 418 aaPredicted RBP19.37■□□□□ 0.69
PRDM4-205ENST00000550376 SH3BGRP55822 239 aaPredicted RBP19.37■□□□□ 0.69
PRDM4-205ENST00000550376 IGLV3-21P80748 117 aaPredicted RBP19.37■□□□□ 0.69
PRDM4-205ENST00000550376 ARMCX4Q5H9R4 360 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 SLC27A4Q6P1M0 643 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 GUSBP11Q6P575 273 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 HSDL2Q6YN16 418 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 SLC34A3Q8N130 599 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 PTPMT1Q8WUK0 201 aaPredicted RBP19.37■□□□□ 0.69
PRDM4-205ENST00000550376 NECAB3Q96P71 396 aaPredicted RBP19.37■□□□□ 0.69
PRDM4-205ENST00000550376 LMF2Q9BU23 707 aaKnown RBP19.37■□□□□ 0.69
PRDM4-205ENST00000550376 NCOR1O75376 2440 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 SH3D21A4FU49 640 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 ANKDD1AQ495B1 522 aa19.37■□□□□ 0.69
PRDM4-205ENST00000550376 B3GLCTQ6Y288 498 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms