RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CXorf56Q9H5V9 222 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 TMEM185BQ9H7F4 350 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 CR1P17927 2039 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 TNFSF11O14788 317 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 KCNH1O95259 989 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 ABCA1O95477 2261 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 OXSR1O95747 527 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-205ENST00000550013 IL11P20809 199 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 ALKBH2Q6NS38 261 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 ANKRD26P1Q6NSI1 321 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 NOXRED1Q6NXP6 359 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 ZAR1Q86SH2 424 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 WDR75Q8IWA0 830 aaKnown RBP13.77□□□□□ -0.21
RAB5C-205ENST00000550013 GTPBP8Q8N3Z3 284 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-205ENST00000550013 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 ZNF611Q8N823 705 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 MAPK1IP1LQ8NDC0 245 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 OR4C3Q8NH37 302 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 FBXO30Q8TB52 745 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 GPR151Q8TDV0 419 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAB5C-205ENST00000550013 EGLN2Q96KS0 407 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 C12orf49Q9H741 205 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 C3orf14Q9HBI5 128 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 TNFRSF12AQ9NP84 129 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 STOML1Q9UBI4 398 aa13.77□□□□□ -0.21
RAB5C-205ENST00000550013 MCTS1Q9ULC4 181 aaKnown RBP13.77□□□□□ -0.21
RAB5C-205ENST00000550013 A0A087WZY1 265 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 A0A0J9YW62 118 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 A0A1W2PRB8 838 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 ALG1L2C9J202 215 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 NDUFB5O43674 189 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 URI1O94763 535 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-205ENST00000550013 SYNGR4O95473 234 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 PRPS2P11908 318 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 PSMA4P25789 261 aaKnown RBP13.76□□□□□ -0.21
RAB5C-205ENST00000550013 MAP3K8P41279 467 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 SLC18A2Q05940 514 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 PLPPR5Q32ZL2 321 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 MFSD12Q6NUT3 480 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 BEND4Q6ZU67 534 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 TRIM46Q7Z4K8 759 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 LCA5Q86VQ0 697 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 CEP112Q8N8E3 955 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 OR2V1Q8NHB1 315 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 HOXB13Q92826 284 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-205ENST00000550013 CIDECQ96AQ7 238 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-205ENST00000550013 SH3YL1Q96HL8 342 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-205ENST00000550013 RNF145Q96MT1 663 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 MED17Q9NVC6 651 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 EMCNQ9ULC0 261 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 LAMP3Q9UQV4 416 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 CADP27708 2225 aa13.76□□□□□ -0.21
RAB5C-205ENST00000550013 TTC36A6NLP5 189 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 ADAMDEC1O15204 470 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 CRLF1O75462 422 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 SOX30O94993 753 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 NKX2-2O95096 273 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 NTN1O95631 604 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 ACP2P11117 423 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 AGTR1P30556 359 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 GPC1P35052 558 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 PRKAG1P54619 331 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 RAC1P63000 192 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 SLC29A2Q14542 456 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 TSC22D1Q15714 1073 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 GLE1Q53GS7 698 aaKnown RBP13.75□□□□□ -0.21
RAB5C-205ENST00000550013 ZNF385BQ569K4 471 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 CPTPQ5TA50 214 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 HBMQ6B0K9 141 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 FIGNL1Q6PIW4 674 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 IKBIPQ70UQ0 350 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 LILRB1Q8NHL6 650 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-205ENST00000550013 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 POC1BQ8TC44 478 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 ROBO4Q8WZ75 1007 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 S100PBPQ96BU1 408 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 REPIN1Q9BWE0 567 aaKnown RBP13.75□□□□□ -0.21
RAB5C-205ENST00000550013 FBXO34Q9NWN3 711 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 PAQR5Q9NXK6 330 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-205ENST00000550013 GPR52Q9Y2T5 361 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 WBP11Q9Y2W2 641 aaKnown RBP13.75□□□□□ -0.21
RAB5C-205ENST00000550013 PTGDR2Q9Y5Y4 395 aa13.75□□□□□ -0.21
RAB5C-205ENST00000550013 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 C7orf72A4D263 438 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 RNF223E7ERA6 249 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 G3V2L1 256 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 PDPK1O15530 556 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 TMCC2O75069 709 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 RSL1D1O76021 490 aaKnown RBP13.74□□□□□ -0.21
RAB5C-205ENST00000550013 TUBBP07437 444 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 NGFRP08138 427 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 ABHD2P08910 425 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 IFI6P09912 130 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 PYGBP11216 843 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 PSMB1P20618 241 aaKnown RBP13.74□□□□□ -0.21
RAB5C-205ENST00000550013 SHC1P29353 583 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 ZNF41P51814 821 aaPredicted RBP13.74□□□□□ -0.21
RAB5C-205ENST00000550013 RPS4XP62701 263 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms