RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 A0A1W2PNV4 684 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 KCNAB3O43448 404 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 ZIC3O60481 467 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 REM1O75628 298 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 JUNP05412 331 aaKnown RBP10.96□□□□□ -0.65
DDX54-206ENST00000549271 STARP49675 285 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 NCBP2P52298 156 aaKnown RBP eCLIP10.96□□□□□ -0.65
DDX54-206ENST00000549271 CORO7P57737 925 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 B3GALT5-AS1P59052 145 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 MRPS22P82650 360 aaKnown RBP10.96□□□□□ -0.65
DDX54-206ENST00000549271 SRYQ05066 204 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 C6orf52Q5T4I8 152 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 OR2A2Q6IF42 318 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 ZNF474Q6S9Z5 364 aaPredicted RBP10.96□□□□□ -0.65
DDX54-206ENST00000549271 ZNF704Q6ZNC4 412 aaPredicted RBP10.96□□□□□ -0.65
DDX54-206ENST00000549271 IKBIPQ70UQ0 350 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 FAM9CQ8IZT9 166 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 ZNF611Q8N823 705 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 TWIST2Q8WVJ9 160 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 GFM2Q969S9 779 aaKnown RBP10.96□□□□□ -0.65
DDX54-206ENST00000549271 SFXN2Q96NB2 322 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 AMDHD1Q96NU7 426 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 ADOQ96SZ5 270 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 STMN4Q9H169 189 aaPredicted RBP10.96□□□□□ -0.65
DDX54-206ENST00000549271 FOLH1BQ9HBA9 442 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 EML4Q9HC35 981 aaKnown RBP10.96□□□□□ -0.65
DDX54-206ENST00000549271 TMEM160Q9NX00 188 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 SENP1Q9P0U3 644 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 GIMAP2Q9UG22 337 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 BAIAP2L1Q9UHR4 511 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 ZDHHC2Q9UIJ5 367 aa10.96□□□□□ -0.65
DDX54-206ENST00000549271 C19orf53Q9UNZ5 99 aaPredicted RBP10.96□□□□□ -0.65
DDX54-206ENST00000549271 PRR14LQ5THK1 2151 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 A0A087WV62 115 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 B4DXG7 233 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 OVOL3O00110 214 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 PIP5K1BO14986 540 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 RGS16O15492 202 aaPredicted RBP10.95□□□□□ -0.66
DDX54-206ENST00000549271 SPRY1O43609 319 aaPredicted RBP10.95□□□□□ -0.66
DDX54-206ENST00000549271 TBX19O60806 448 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 PSMG1O95456 288 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 TGM6O95932 706 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 CHEK2O96017 543 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 NEFHP12036 1026 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 SDC1P18827 310 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 GRK2P25098 689 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 DPP4P27487 766 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 IDUAP35475 653 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 KRT20P35900 424 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 SERPINB5P36952 375 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 DSCR4P56555 118 aaPredicted RBP10.95□□□□□ -0.66
DDX54-206ENST00000549271 SRSF2Q01130 221 aaKnown RBP10.95□□□□□ -0.66
DDX54-206ENST00000549271 MPP2Q14168 576 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 ZNF385BQ569K4 471 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 XKR7Q5GH72 579 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 SH2D4BQ5SQS7 431 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 ANKRD26P1Q6NSI1 321 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 LARP4Q71RC2 724 aaKnown RBP eCLIP10.95□□□□□ -0.66
DDX54-206ENST00000549271 ZNF550Q7Z398 422 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 BTLAQ7Z6A9 289 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 GRAMD2AQ8IUY3 354 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 FADS6Q8N9I5 356 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 OR4N2Q8NGD1 307 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 ZBTB9Q96C00 473 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 STARD4Q96DR4 205 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 ELP4Q96EB1 424 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 ZNF764Q96H86 408 aaPredicted RBP10.95□□□□□ -0.66
DDX54-206ENST00000549271 C3orf30Q96M34 536 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 ZIM3Q96PE6 472 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 CCT7Q99832 543 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 PLA2G12AQ9BZM1 189 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 SSU72Q9NP77 194 aaKnown RBP10.95□□□□□ -0.66
DDX54-206ENST00000549271 MIEF1Q9NQG6 463 aa10.95□□□□□ -0.66
DDX54-206ENST00000549271 DYSFO75923 2080 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.94□□□□□ -0.66
DDX54-206ENST00000549271 LINC01387J3KSC0 135 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 UPK1AO00322 258 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 HS3ST1O14792 307 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 KLF4O43474 513 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 AKAP10O43572 662 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 ITM2AO43736 263 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 SLITRK5O94991 958 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 TUBBP07437 444 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 THBS1P07996 1170 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 DHRS4L1P0CG22 281 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 BCKDHAP12694 445 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 PEPDP12955 493 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 IL12BP29460 328 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 SERPINB4P48594 390 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 EEFSECP57772 596 aaKnown RBP10.94□□□□□ -0.66
DDX54-206ENST00000549271 RPS4XP62701 263 aaKnown RBP10.94□□□□□ -0.66
DDX54-206ENST00000549271 RPL38P63173 70 aaKnown RBP10.94□□□□□ -0.66
DDX54-206ENST00000549271 PSG6Q00889 435 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 OCRLQ01968 901 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 PDE7AQ13946 482 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 GANABQ14697 944 aaKnown RBP10.94□□□□□ -0.66
DDX54-206ENST00000549271 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 CEP85LQ5SZL2 805 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 VWA1Q6PCB0 445 aa10.94□□□□□ -0.66
DDX54-206ENST00000549271 TMEM107Q6UX40 140 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms