RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 CYTH2Q99418 400 aa3.46□□□□□ -1.85
APAF1-208ENST00000549007 RBBP8Q99708 897 aa3.46□□□□□ -1.85
APAF1-208ENST00000549007 CCDC3Q9BQI4 270 aa3.46□□□□□ -1.85
APAF1-208ENST00000549007 GSDMCQ9BYG8 508 aa3.46□□□□□ -1.85
APAF1-208ENST00000549007 UTP6Q9NYH9 597 aaKnown RBP3.46□□□□□ -1.85
APAF1-208ENST00000549007 TDRKHQ9Y2W6 561 aaKnown RBP3.46□□□□□ -1.85
APAF1-208ENST00000549007 LY6G6EA0A0G2JKS1 128 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 FAM90A10PA6NDY2 464 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 LMO7DNF2Z398 122 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 H3BMM5 538 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 CCL24O00175 119 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 PGRMC2O15173 223 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 GUCA1CO95843 209 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 SLC35G4P0C7Q5 338 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 MYZAPP0CAP1 466 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 IDSP22304 550 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 ALDH4A1P30038 563 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 CASP9P55211 416 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 MTCP1P56278 107 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 PPP1CAP62136 330 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 IFFO1Q0D2I5 559 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 KLHL38Q2WGJ6 581 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 ZNF658BQ4V348 819 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 BCL7AQ4VC05 210 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 MFSD12Q6NUT3 480 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 KCTD18Q6PI47 426 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 MSANTD1Q6ZTZ1 278 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 GKN2Q86XP6 184 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 CLEC1AQ8NC01 280 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 OR2L2Q8NH16 312 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 DCAKDQ8WVC6 231 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 EEF1AKMT1Q8WVE0 214 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 TMEM159Q96B96 161 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 LINGO1Q96FE5 620 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 C3orf30Q96M34 536 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 PANX3Q96QZ0 392 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 TBC1D10AQ9BXI6 508 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 RHOJQ9H4E5 214 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 RDH14Q9HBH5 336 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 INTS10Q9NVR2 710 aaKnown RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 TRNAU1APQ9NX07 287 aaKnown RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 NDUFA13Q9P0J0 144 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 ZNF624Q9P2J8 865 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 TRMT6Q9UJA5 497 aaKnown RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 SPIN1Q9Y657 262 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 RNF215Q9Y6U7 377 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 U3KQA8 63 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 NCF1BA6NI72 391 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 NCF1CA8MVU1 366 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 CDC7O00311 574 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 VPS26AO75436 327 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 BMP10O95393 424 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 SYF2O95926 243 aaKnown RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 FTH1P02794 183 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 NCF1P14598 390 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 RPS3P23396 243 aaKnown RBP eCLIP3.46□□□□□ -1.86
APAF1-208ENST00000549007 NKX2-1P43699 371 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 LIMK2P53671 638 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 OR1D5P58170 312 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 DLG1Q12959 904 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 C18orf21Q32NC0 220 aaPredicted RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 C2orf76Q3KRA6 126 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 GCNT6Q5T4J0 391 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 LYPLAL1Q5VWZ2 237 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 EMBQ6PCB8 327 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 C11orf88Q6PI97 169 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 PM20D2Q8IYS1 436 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 CLYBLQ8N0X4 340 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 C4orf33Q8N1A6 199 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 ARL14Q8N4G2 192 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 SEMA6DQ8NFY4 1073 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 OR10G6Q8NH81 332 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 KCTD4Q8WVF5 259 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 OTULINQ96BN8 352 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 CXorf40BQ96DE9 158 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 TIMM29Q9BSF4 260 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 OR52A5Q9H2C5 316 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 LIN28AQ9H9Z2 209 aaKnown RBP3.46□□□□□ -1.86
APAF1-208ENST00000549007 DNAJC11Q9NVH1 559 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 ASF1AQ9Y294 204 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 IKBKGQ9Y6K9 419 aa3.46□□□□□ -1.86
APAF1-208ENST00000549007 DCHS1Q96JQ0 3298 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 CEP295Q9C0D2 2601 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 SLC5A10A0PJK1 596 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 HYKKA2RU49 373 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 PFDN6O15212 129 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 TLX3O43711 291 aaPredicted RBP3.45□□□□□ -1.86
APAF1-208ENST00000549007 FCGR3BO75015 233 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 SPAG6O75602 509 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 AP2A2O94973 939 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 CH25HO95992 272 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 OR2T7P0C7T2 308 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 F3P13726 295 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 MYOD1P15172 320 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 VCLP18206 1134 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 CALRP27797 417 aaKnown RBP3.45□□□□□ -1.86
APAF1-208ENST00000549007 SPRP35270 261 aaPredicted RBP3.45□□□□□ -1.86
APAF1-208ENST00000549007 NOVA1P51513 510 aaKnown RBP3.45□□□□□ -1.86
APAF1-208ENST00000549007 VEZF1Q14119 521 aa3.45□□□□□ -1.86
APAF1-208ENST00000549007 PHKG1Q16816 387 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms