RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 H2AFXP16104 143 aaPredicted RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 TBXA2RP21731 343 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 MAT2AP31153 395 aaKnown RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 DMTNQ08495 405 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 RBBP4Q09028 425 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ARL16Q0P5N6 197 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ENPP2Q13822 863 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 CHI3L2Q15782 390 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 TMEM44Q2T9K0 475 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 CELF3Q5SZQ8 465 aaKnown RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 AGAP7PQ5VUJ5 663 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 LRRC66Q68CR7 880 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 LEG1Q6P5S2 330 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 BZW1Q7L1Q6 419 aaKnown RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ANKRD37Q7Z713 158 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 DCUN1D3Q8IWE4 304 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 SLC38A6Q8IZM9 456 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ZNF843Q8N446 348 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 SPEM1Q8N4L4 309 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 COMMD1Q8N668 190 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 OR5T2Q8NGG2 359 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 OR5M9Q8NGP3 310 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 OR6F1Q8NGZ6 308 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 NANPQ8TBE9 248 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ZNRF4Q8WWF5 429 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 FAM3CQ92520 227 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 DYRK2Q92630 601 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 LHX4Q969G2 390 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 AGAP4Q96P64 663 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 PINK1Q9BXM7 581 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 FNDC4Q9H6D8 234 aaPredicted RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 IL1RL2Q9HB29 575 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 NMUR1Q9HB89 426 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ZFP14Q9HCL3 533 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 INTS9Q9NV88 658 aaKnown RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ADAM28Q9UKQ2 775 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 EMCNQ9ULC0 261 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 TRAF3IP3Q9Y228 551 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 CA5BQ9Y2D0 317 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ZHX2Q9Y6X8 837 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 SAMD9LQ8IVG5 1584 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 INO80Q9ULG1 1556 aaPredicted RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 NKTRP30414 1462 aaKnown RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 GOLGA3Q08378 1498 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 CAMSAP2Q08AD1 1489 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ATP10DQ9P241 1426 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 A0A1W2PNV4 684 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 A8MU76 341 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 PRAC2D3DTV9 90 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 C16orf97H3BN30 126 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 M0QX08 132 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 FOXE1O00358 373 aaPredicted RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 CYB561D2O14569 222 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 ABCD4O14678 606 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 IMPA2O14732 288 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 LSM1O15116 133 aaKnown RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 CTAG2O75638 210 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 PGK1P00558 417 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 TSHBP01222 138 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 OPN1LWP04000 364 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 GPIP06744 558 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 ACADSP16219 412 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 TNNI1P19237 187 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 GPR183P32249 361 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 NUP62P37198 522 aaPredicted RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 SLC1A4P43007 532 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 TPMTP51580 245 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 AP3M2P53677 418 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 CARD18P57730 90 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 NTHL1P78549 312 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 DNAJC3Q13217 504 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 DOC2AQ14183 400 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 ATXN7L3Q14CW9 347 aaPredicted RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 P2RY6Q15077 328 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 TECRLQ5HYJ1 363 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 PDZK1Q5T2W1 519 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 STPG1Q5TH74 334 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 AADACL4Q5VUY2 407 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 RAET1LQ5VY80 246 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 GCNT7Q6ZNI0 430 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 EIF3MQ7L2H7 374 aaKnown RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 CHMP1BQ7LBR1 199 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 TSEN54Q7Z6J9 526 aaKnown RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 MOB3BQ86TA1 216 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 CCDC50Q8IVM0 306 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 SLC22A15Q8IZD6 547 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 OFCC1Q8IZS5 231 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 C17orf47Q8NEP4 570 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 DMBX1Q8NFW5 382 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 OR4D5Q8NGN0 318 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 C2orf48Q96LS8 159 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 IL17FQ96PD4 163 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 CPXM1Q96SM3 734 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 SLC25A51Q9H1U9 297 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 RHOJQ9H4E5 214 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 NRN1Q9NPD7 142 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 DCAF13Q9NV06 445 aaKnown RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 EIF3LQ9Y262 564 aaKnown RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 DHRS7Q9Y394 339 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms