RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 C2orf73Q8N5S3 287 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 OR51D1Q8NGF3 324 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SPRYD4Q8WW59 207 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 TMEM234Q8WY98 164 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 BMFQ96LC9 184 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 LRFN1Q9P244 771 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 CLEC4EQ9ULY5 219 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SCML1Q9UN30 329 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 D6RAR5 112 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 YKT6O15498 198 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 NAT1P18440 290 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 PBX2P40425 430 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 AMZ1Q400G9 498 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ALKAL2Q6UX46 152 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 VASH1Q7L8A9 365 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ZER1Q7Z7L7 766 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 Q8N9G6 341 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 GPR26Q8NDV2 337 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF680Q8NEM1 530 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 DNAAF1Q8NEP3 725 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ZCCHC10Q8TBK6 192 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 CHTF18Q8WVB6 975 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF689Q96CS4 500 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ZDHHC12Q96GR4 267 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 PRAP1Q96NZ9 151 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 DGAT2Q96PD7 388 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 CMKLR1Q99788 373 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 NKX6-2Q9C056 277 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SLC35F4A4IF30 521 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 TOR1AO14656 332 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 BDKRB1P46663 353 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 IL13RA1P78552 427 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 PRKCZQ05513 592 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SPIN3Q5JUX0 258 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 NXPE4Q6UWF7 544 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 GPR155Q7Z3F1 870 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SFXN5Q8TD22 340 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 C16orf78Q8WTQ4 265 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 KLHL15Q96M94 604 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 NIT2Q9NQR4 276 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 PDLIM7Q9NR12 457 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 RCE1Q9Y256 329 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 QSER1Q2KHR3 1735 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 PPP1R2P9O14990 202 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 GSRP00390 522 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 EPHX1P07099 455 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 CR2P20023 1033 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 GP2P55259 537 aaKnown RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 GPR17Q13304 367 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 HTR4Q13639 388 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SLC18B1Q6NT16 456 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 OR5M3Q8NGP4 307 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF461Q8TAF7 563 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 FNDC9Q8TBE3 224 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 STMND1H3BQB6 276 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 OR2F2O95006 317 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 PMS2P2O95744 297 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 GAAP10253 952 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 TGM1P22735 817 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 LIPAP38571 399 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 OR2F1Q13607 317 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 BCL2A1Q16548 175 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 POM121L1PQ3SYA9 428 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 PSAPL1Q6NUJ1 521 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 C22orf39Q6P5X5 142 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 COMMD6Q7Z4G1 85 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 CPA6Q8N4T0 437 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 RAB39BQ96DA2 213 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 MOCOSQ96EN8 888 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 PKMYT1Q99640 499 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 INPP5KQ9BT40 448 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 ANKRD19PQ9H560 264 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF175Q9Y473 711 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 TBC1D3KA0A087X1G2 549 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 RPS10-NUDT3A0A1W2PQS6 291 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 TBC1D3FA6NER0 549 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-212ENST00000546744 VEGFDO43915 354 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 RPS10P46783 165 aaKnown RBP12.08□□□□□ -0.48
PTCH1-212ENST00000546744 FOXA1P55317 472 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 SMN1Q16637 294 aaKnown RBP12.08□□□□□ -0.48
PTCH1-212ENST00000546744 PGGHGQ32M88 737 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 TBC1D3GQ6DHY5 549 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 FAM199XQ6PEV8 388 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF534Q76KX8 674 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 C14orf80Q86SX3 495 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 NPWQ8N729 165 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 CLRN3Q8NCR9 226 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 OR2M4Q96R27 311 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 WRAP53Q9BUR4 548 aaKnown RBP12.08□□□□□ -0.48
PTCH1-212ENST00000546744 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 PELI2Q9HAT8 420 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 FBXL4Q9UKA2 621 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 SLC22A23A1A5C7 686 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms