RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 TWIST2Q8WVJ9 160 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 HOXB13Q92826 284 aaPredicted RBP12.86□□□□□ -0.35
TROAP-203ENST00000546735 ZBED6CLQ96FA7 236 aaPredicted RBP12.86□□□□□ -0.35
TROAP-203ENST00000546735 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
TROAP-203ENST00000546735 ZNF764Q96H86 408 aaPredicted RBP12.86□□□□□ -0.35
TROAP-203ENST00000546735 SH3YL1Q96HL8 342 aaPredicted RBP12.86□□□□□ -0.35
TROAP-203ENST00000546735 MS4A4EQ96PG1 132 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 SMR3AQ99954 134 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 PPCSQ9HAB8 311 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 SLC17A7Q9P2U7 560 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 MID2Q9UJV3 735 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 ZNF175Q9Y473 711 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 AP4B1Q9Y6B7 739 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 ABCA4P78363 2273 aa12.86□□□□□ -0.35
TROAP-203ENST00000546735 TTC36A6NLP5 189 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 ALG1L2C9J202 215 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 EMC8O43402 210 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 SPAG7O75391 227 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 KCNK2O95069 426 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 BCKDHAP12694 445 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 HOXB4P17483 251 aaPredicted RBP12.85□□□□□ -0.35
TROAP-203ENST00000546735 GUSBP1Q15486 140 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 EXOC3L2Q2M3D2 409 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 GLYR1Q49A26 553 aaPredicted RBP12.85□□□□□ -0.35
TROAP-203ENST00000546735 VPS26BQ4G0F5 336 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 ARL13AQ5H913 290 aaPredicted RBP12.85□□□□□ -0.35
TROAP-203ENST00000546735 RNF165Q6ZSG1 346 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 ZCCHC23Q6ZST2 131 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 BANPQ8N9N5 519 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 FAM110BQ8TC76 370 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 JADE3Q92613 823 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 FAM120BQ96EK7 910 aaKnown RBP12.85□□□□□ -0.35
TROAP-203ENST00000546735 CHMP6Q96FZ7 201 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 TRMOQ9BU70 441 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 MED18Q9BUE0 208 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 PRRG4Q9BZD6 226 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 IQCGQ9H095 443 aaKnown RBP12.85□□□□□ -0.35
TROAP-203ENST00000546735 TMEM185BQ9H7F4 350 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 NEUROD4Q9HD90 331 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 NTMQ9P121 344 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 PROCRQ9UNN8 238 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 TRAF6Q9Y4K3 522 aa12.85□□□□□ -0.35
TROAP-203ENST00000546735 PCNX3Q9H6A9 2034 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 A0A1W2PRB8 838 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 CXCL13O43927 109 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 PEX11AO75192 247 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 ALOX5P09917 674 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 CD8BP10966 210 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 TBXA2RP21731 343 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 HOXC12P31275 282 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 ARRB2P32121 409 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 UGT2B10P36537 528 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 NKX6-1P78426 367 aaPredicted RBP12.84□□□□□ -0.35
TROAP-203ENST00000546735 CD226Q15762 336 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.84□□□□□ -0.35
TROAP-203ENST00000546735 UGT3A2Q3SY77 523 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 Q71RC1 249 aaPredicted RBP12.84□□□□□ -0.35
TROAP-203ENST00000546735 FAM214BQ7L5A3 538 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 CXorf67Q86X51 503 aaPredicted RBP12.84□□□□□ -0.35
TROAP-203ENST00000546735 COX18Q8N8Q8 333 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 OR7A2PQ8NGA2 310 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 OR10D3Q8NH80 312 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 POC1BQ8TC44 478 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 RNF145Q96MT1 663 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 HS3ST6Q96QI5 342 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 SLC39A3Q9BRY0 314 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 SIRT3Q9NTG7 399 aaPredicted RBP12.84□□□□□ -0.35
TROAP-203ENST00000546735 ACSS1Q9NUB1 689 aaPredicted RBP12.84□□□□□ -0.35
TROAP-203ENST00000546735 ZCCHC3Q9NUD5 404 aaKnown RBP12.84□□□□□ -0.35
TROAP-203ENST00000546735 MED17Q9NVC6 651 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 GIN1Q9NXP7 522 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 ELOVL5Q9NYP7 299 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 TMED5Q9Y3A6 229 aa12.84□□□□□ -0.35
TROAP-203ENST00000546735 VPS13CQ709C8 3753 aa12.83□□□□□ -0.35
TROAP-203ENST00000546735 NF1P21359 2839 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 NPIPA5A0A0B4J1W7 369 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 NPIPA7E9PJI5 369 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 C16orf97H3BN30 126 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 NPHS1O60500 1241 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 SLU7O95391 586 aaKnown RBP12.83□□□□□ -0.36
TROAP-203ENST00000546735 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.36
TROAP-203ENST00000546735 FGF4P08620 206 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 NPIPA8P0DM63 369 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 LAMP1P11279 417 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 IL11P20809 199 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 CRYGSP22914 178 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 PSMA4P25789 261 aaKnown RBP12.83□□□□□ -0.36
TROAP-203ENST00000546735 ASMTP46597 345 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 PRIM2P49643 509 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 LASP1Q14847 261 aaKnown RBP12.83□□□□□ -0.36
TROAP-203ENST00000546735 CTU2Q2VPK5 515 aaKnown RBP12.83□□□□□ -0.36
TROAP-203ENST00000546735 EXOSC6Q5RKV6 272 aaKnown RBP12.83□□□□□ -0.36
TROAP-203ENST00000546735 GTPBP8Q8N3Z3 284 aaPredicted RBP12.83□□□□□ -0.36
TROAP-203ENST00000546735 OR6Y1Q8NGX8 325 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 CDS1Q92903 461 aa12.83□□□□□ -0.36
TROAP-203ENST00000546735 MTERF3Q96E29 417 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms