RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 HINT3Q9NQE9 182 aaKnown RBP13.72□□□□□ -0.21
HOXC11-202ENST00000546378 HCN3Q9P1Z3 774 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 A4GNTQ9UNA3 340 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ENTPD4Q9Y227 616 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 CENPVL1A0A0U1RR11 272 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 SLC9B1P1A6NJY1 282 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 KHDRBS3O75525 346 aaKnown RBP13.71□□□□□ -0.21
HOXC11-202ENST00000546378 SRPRAP08240 638 aaKnown RBP13.71□□□□□ -0.21
HOXC11-202ENST00000546378 NTSP30990 170 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 MAPK8P45983 427 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 CCR4P51679 360 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 PLK5Q496M5 336 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 GGTA1PQ4G0N0 100 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 TMEM31Q5JXX7 168 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 MZT2AQ6P582 158 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 NDUFAF7Q7L592 441 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 SIAH3Q8IW03 269 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 GATSQ8NAP1 163 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 GIMAP1Q8WWP7 306 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 TM4SF18Q96CE8 201 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 ATG4BQ9Y4P1 393 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 COL4A6Q14031 1691 aa13.71□□□□□ -0.21
HOXC11-202ENST00000546378 AGAP14A8MT82 685 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 PDGFAP04085 211 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 SQSTM1Q13501 440 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 C17orf47Q8NEP4 570 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 HCAR2Q8TDS4 363 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 C4orf36Q96KX1 117 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 MNTQ99583 582 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 ATF6BQ99941 703 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 ALG8Q9BVK2 526 aa13.71□□□□□ -0.22
HOXC11-202ENST00000546378 NFKBIL1Q9UBC1 381 aaPredicted RBP13.71□□□□□ -0.22
HOXC11-202ENST00000546378 TCRBV16S1A1N1A0A5B0 115 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 LRRC72A6NJI9 287 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 ACOD1A6NK06 481 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 LEUTXA8MZ59 168 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 IDSB3KWA1 339 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 IMPA2O14732 288 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 HSD3B1P14060 373 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 BMP7P18075 431 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 IL1RNP18510 177 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 POU3F2P20265 443 aaPredicted RBP13.7□□□□□ -0.22
HOXC11-202ENST00000546378 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
HOXC11-202ENST00000546378 PPP3R1P63098 170 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 LAMTOR1Q6IAA8 161 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 RFLNBQ8N5W9 214 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 SLC16A11Q8NCK7 471 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 ZNF680Q8NEM1 530 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 OR11H7Q8NGC8 314 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 CDC42EP2O14613 210 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 IL1AP01583 271 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 AKR1C2P52895 323 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 BTN3A2P78410 334 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 AKR1C1Q04828 323 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 SFRP5Q5T4F7 317 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 CXXC5Q7LFL8 322 aaKnown RBP13.7□□□□□ -0.22
HOXC11-202ENST00000546378 GPR155Q7Z3F1 870 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 FGD2Q7Z6J4 655 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 FAM98AQ8NCA5 519 aaKnown RBP13.7□□□□□ -0.22
HOXC11-202ENST00000546378 OR4Q3Q8NH05 313 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 OR4K13Q8NH42 304 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 PIGXQ8TBF5 258 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 AIF1LQ9BQI0 150 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 PBX4Q9BYU1 374 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 RNF32Q9H0A6 362 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 IL36AQ9UHA7 158 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 LSM2Q9Y333 95 aaKnown RBP13.7□□□□□ -0.22
HOXC11-202ENST00000546378 CABIN1Q9Y6J0 2220 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 A0A087WV48 116 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 SLC31A1O15431 190 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 ARPC5O15511 151 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 PRODHO43272 600 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 VEGFCP49767 419 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 PRPF38BQ5VTL8 546 aaKnown RBP13.7□□□□□ -0.22
HOXC11-202ENST00000546378 TMEM91Q6ZNR0 172 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 CFAP77Q6ZQR2 320 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 UBE2Q1Q7Z7E8 422 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 ZNF761Q86XN6 746 aaPredicted RBP13.7□□□□□ -0.22
HOXC11-202ENST00000546378 RDH10Q8IZV5 341 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 FRMD1Q8N878 549 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 ZBTB44Q8NCP5 570 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 OR52B4Q8NGK2 314 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 FIBINQ8TAL6 211 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 ELMOD3Q96FG2 381 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 DERL3Q96Q80 235 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 SYNPO2LQ9H987 977 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 FKBP14Q9NWM8 211 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 RCE1Q9Y256 329 aa13.7□□□□□ -0.22
HOXC11-202ENST00000546378 OR6C74A6NCV1 312 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 SNTNA6NMZ2 147 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 GREM1O60565 184 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 HCN1O60741 890 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 SLCO2B1O94956 709 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 NPR2P20594 1047 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 RPL4P36578 427 aaKnown RBP13.69□□□□□ -0.22
HOXC11-202ENST00000546378 KCNJ5P48544 419 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 ANXA11P50995 505 aaKnown RBP13.69□□□□□ -0.22
HOXC11-202ENST00000546378 MAZP56270 477 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms