RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 EMP2P54851 167 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 DNAJB13P59910 316 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 CSNK2BP67870 215 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 CDKL1Q00532 357 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 GBE1Q04446 702 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 RUNX1T1Q06455 604 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 SLC10A2Q12908 348 aaPredicted RBP6.1□□□□□ -1.43
CCDC60-205ENST00000546345 MALLQ13021 153 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 RAB39AQ14964 217 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 ACAP2Q15057 778 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 PAFAH1B3Q15102 231 aaKnown RBP6.1□□□□□ -1.43
CCDC60-205ENST00000546345 SYT16Q17RD7 645 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 SLC25A35Q3KQZ1 300 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 RBM20Q5T481 1227 aaKnown RBP6.1□□□□□ -1.43
CCDC60-205ENST00000546345 ANKRD22Q5VYY1 191 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 PLAG1Q6DJT9 500 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 LCN8Q6JVE9 175 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 SLC25A25Q6KCM7 469 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 PODNL1Q6PEZ8 512 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 UNC5DQ6UXZ4 953 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 KIAA0408Q6ZU52 694 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 USP51Q70EK9 711 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 FAM47BQ8NA70 645 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 KCTD6Q8NC69 237 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 OR52N2Q8NGI0 321 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 SPATA22Q8NHS9 363 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 BLOC1S5Q8TDH9 187 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 HSPH1Q92598 858 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 HDAC2Q92769 488 aaKnown RBP6.1□□□□□ -1.43
CCDC60-205ENST00000546345 CFAP36Q96G28 342 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 ARPC5LQ9BPX5 153 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 UTP23Q9BRU9 249 aaKnown RBP6.1□□□□□ -1.43
CCDC60-205ENST00000546345 WDR83Q9BRX9 315 aaKnown RBP6.1□□□□□ -1.43
CCDC60-205ENST00000546345 CCM2Q9BSQ5 444 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 NDEL1Q9GZM8 345 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 COQ10BQ9H8M1 238 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 CCNB1IP1Q9NPC3 277 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 SMPD3Q9NY59 655 aaPredicted RBP6.1□□□□□ -1.43
CCDC60-205ENST00000546345 ACTR3BQ9P1U1 418 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.1□□□□□ -1.43
CCDC60-205ENST00000546345 CD300AQ9UGN4 299 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 ZNF639Q9UID6 485 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 TEKT2Q9UIF3 430 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 NDUFAF1Q9Y375 327 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 LIPGQ9Y5X9 500 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 HSPE1-MOB4S4R3N1 261 aa6.1□□□□□ -1.43
CCDC60-205ENST00000546345 LOC105369274A0A096LPK9 316 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 LOC102723532A0A0G2JNH3 316 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 HYKKA2RU49 373 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 MBD3L4A6NDZ8 208 aaPredicted RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 MBD3L5A6NJ08 208 aaPredicted RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 CLCA1A8K7I4 914 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 AGAP14A8MT82 685 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 APOL1O14791 398 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 AIM2O14862 343 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 CLOCKO15516 846 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 PHGDHO43175 533 aaKnown RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 PSMD3O43242 534 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 ARHGEF9O43307 516 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 MTRF1O75570 445 aaKnown RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 VAPBO95292 243 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 NDST3O95803 873 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 CCDC159P0C7I6 412 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 KITP10721 976 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 MSH3P20585 1137 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 CXCR2P25025 360 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 ACVR2AP27037 513 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 ACADLP28330 430 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 TYK2P29597 1187 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 PKLRP30613 574 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 UQCRC1P31930 480 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 ZFP36L2P47974 494 aaKnown RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 PPP5CP53041 499 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 VSX2P58304 361 aaPredicted RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 DEFA1P59665 94 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 DEFA3P59666 94 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 GNG2P59768 71 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 CXCR4P61073 352 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 PSME3P61289 254 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 ZNF45Q02386 682 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 CEACAM7Q14002 265 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 GRB7Q14451 532 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 EFTUD2Q15029 972 aaKnown RBP eCLIP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 ELAVL1Q15717 326 aaKnown RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 KCNJ8Q15842 424 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 ATP6AP1Q15904 470 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 PRTGQ2VWP7 1150 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 BTBD16Q32M84 506 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 FBXL19-AS1Q494R0 122 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 AARS2Q5JTZ9 985 aaKnown RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 SLC9A4Q6AI14 798 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 C8orf82Q6P1X6 216 aaPredicted RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 PRSS57Q6UWY2 283 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 ZYG11AQ6WRX3 759 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 SEM1Q6ZVN7 128 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 WDR53Q7Z5U6 358 aaPredicted RBP6.09□□□□□ -1.43
CCDC60-205ENST00000546345 LINC00523Q86TU6 105 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 AKAP14Q86UN6 197 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 IGFN1Q86VF2 1251 aa6.09□□□□□ -1.43
CCDC60-205ENST00000546345 CAND1Q86VP6 1230 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms