RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 OXSR1O95747 527 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-216ENST00000544989 ZNF17P17021 662 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 HK1P19367 917 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 EFNA1P20827 205 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-216ENST00000544989 OPRM1P35372 400 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 SOAT1P35610 550 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 ADH7P40394 386 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 LHX2P50458 406 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 HBA1P69905 142 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 TFF3Q07654 80 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 STX5Q13190 355 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 CDSNQ15517 529 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 RAET1LQ5VY80 246 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 OR5M10Q6IEU7 315 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 MEX3BQ6ZN04 569 aaKnown RBP10.71□□□□□ -0.69
HDAC4-216ENST00000544989 HDXQ7Z353 690 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 MARCH3Q86UD3 253 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 MEIOBQ8N635 442 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 TRIML2Q8N7C3 387 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 GLB1L3Q8NCI6 653 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-216ENST00000544989 OR4A15Q8NGL6 344 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 MBD3L2Q8NHZ7 208 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-216ENST00000544989 ACTRT2Q8TDY3 377 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 OIT3Q8WWZ8 545 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 WNT2BQ93097 391 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 C16orf58Q96GQ5 468 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 TRIB1Q96RU8 372 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 CXorf36Q9H7Y0 433 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 VIPAS39Q9H9C1 493 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 GPATCH2Q9NW75 528 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 MED11Q9P086 117 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 AP4B1Q9Y6B7 739 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 SDHDO14521 159 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 IGKV1D-16P01601 117 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 IDO1P14902 403 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF708P17019 499 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 IGFBP2P18065 325 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 UQCRC2P22695 453 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 CTSSP25774 331 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 S100A3P33764 101 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 ASCL1P50553 236 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 ANXA11P50995 505 aaKnown RBP10.7□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF41P51814 821 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-216ENST00000544989 DCST1Q5T197 706 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 DCST2Q5T1A1 773 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 ATAD3BQ5T9A4 648 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 OR4F3Q6IEY1 312 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 FIGNL1Q6PIW4 674 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 ADGRE4PQ86SQ3 457 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 FBXO30Q8TB52 745 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 PIWIL2Q8TC59 973 aaKnown RBP10.7□□□□□ -0.7
HDAC4-216ENST00000544989 MIPOL1Q8TD10 442 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 CDS1Q92903 461 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 ZBTB8AQ96BR9 441 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 ATP6V1G3Q96LB4 118 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 YIPF4Q9BSR8 244 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 SFXN3Q9BWM7 321 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 UCK2Q9BZX2 261 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 EXD2Q9NVH0 621 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 AIG1Q9NVV5 245 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 KCNN3Q9UGI6 736 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 BTNL2Q9UIR0 455 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 RPH3AQ9Y2J0 694 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-216ENST00000544989 CCDC168Q8NDH2 2452 aa10.7□□□□□ -0.7
HDAC4-216ENST00000544989 INTS1Q8N201 2190 aaKnown RBP10.7□□□□□ -0.7
HDAC4-216ENST00000544989 NUP214P35658 2090 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 ARHGAP21Q5T5U3 1957 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 RNF103-CHMP3A0A140T963 221 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 C7orf72A4D263 438 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 NKX2-6A6NCS4 301 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 HMGB1P1B2RPK0 211 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 C19orf84I3L1E1 186 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 ANKRD28O15084 1053 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 RCBTB2O95199 551 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 TGDSO95455 350 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 IL6P05231 212 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 CRHP06850 196 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 GUSBP08236 651 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 CAPN3P20807 821 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 MATN1P21941 496 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 BMP5P22003 454 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 EIF1P41567 113 aaKnown RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 MAGEA8P43361 318 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 DGKQP52824 942 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 SUMO3P55854 103 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 CLDN18P56856 261 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 RPS3AP61247 264 aaKnown RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 SRYQ05066 204 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 FGFBP1Q14512 234 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 GSTA3Q16772 222 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 KRTAP21-3Q3LHN1 58 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 FBXL19-AS1Q494R0 122 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 FLYWCH1Q4VC44 716 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 NXNQ6DKJ4 435 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 OR2A2Q6IF42 318 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 SEM1Q6ZVN7 128 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 C6orf120Q7Z4R8 191 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 GRAMD2AQ8IUY3 354 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 WDR75Q8IWA0 830 aaKnown RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 DMRTC2Q8IXT2 367 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms