RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 HEPACAMQ14CZ8 416 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 GALNT18Q6P9A2 607 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 TMEM107Q6UX40 140 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 ESPNLQ6ZVH7 1005 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 EXOC3L1Q86VI1 746 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 OR2L13Q8N349 312 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 CDYL2Q8N8U2 506 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 POC1BQ8TC44 478 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 RNF128Q8TEB7 428 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 ABHD3Q8WU67 409 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 ROBO4Q8WZ75 1007 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 HSD17B8Q92506 261 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 SLC9A6Q92581 669 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 HS6ST2Q96MM7 605 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 C19orf24Q9BVV8 132 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 TBL1XR1Q9BZK7 514 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 TMEM185BQ9H7F4 350 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 BARX1Q9HBU1 254 aaPredicted RBP13.75□□□□□ -0.21
CD4-212ENST00000544344 Q9N2J8 555 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 GIMAP4Q9NUV9 329 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 TMEM160Q9NX00 188 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 STOML1Q9UBI4 398 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 B3GALT5Q9Y2C3 310 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 MALRD1Q5VYJ5 2156 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 SVEP1Q4LDE5 3571 aa13.75□□□□□ -0.21
CD4-212ENST00000544344 A0A087WZY1 265 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 GNG14A0A1W2PPG7 69 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 SHISA9B4DS77 424 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 SMIM24O75264 130 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 PTNP21246 168 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 SHC1P29353 583 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 TIA1P31483 386 aaKnown RBP eCLIP13.74□□□□□ -0.21
CD4-212ENST00000544344 HSD17B3P37058 310 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 RFX3P48380 749 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 HTR6P50406 440 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 VLDLRP98155 873 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 SRSF2Q01130 221 aaKnown RBP13.74□□□□□ -0.21
CD4-212ENST00000544344 UAP1Q16222 522 aaPredicted RBP13.74□□□□□ -0.21
CD4-212ENST00000544344 PLPPR5Q32ZL2 321 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 HBMQ6B0K9 141 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 OSTF1Q92882 214 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 RNF145Q96MT1 663 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 TNFRSF13CQ96RJ3 184 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 BBS4Q96RK4 519 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 RHNO1Q9BSD3 238 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 EBPLQ9BY08 206 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 NGBQ9NPG2 151 aa13.74□□□□□ -0.21
CD4-212ENST00000544344 A0A1W2PRB8 838 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 FAM234BA2RU67 622 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 A8MT66 165 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 ZNF814B7Z6K7 855 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 ALG1L2C9J202 215 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 SLITRK5O94991 958 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 ADAP00813 363 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 DDCP20711 480 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 IL32P24001 234 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 THBS2P35442 1172 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 MAP3K8P41279 467 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 NCBP2P52298 156 aaKnown RBP eCLIP13.73□□□□□ -0.21
CD4-212ENST00000544344 GNG11P61952 73 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 IRX1P78414 480 aaPredicted RBP13.73□□□□□ -0.21
CD4-212ENST00000544344 LOXL1Q08397 574 aaPredicted RBP13.73□□□□□ -0.21
CD4-212ENST00000544344 ZNF239Q16600 458 aaKnown RBP13.73□□□□□ -0.21
CD4-212ENST00000544344 SPIN4Q56A73 249 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 CPTPQ5TA50 214 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 TUSC5Q8IXB3 177 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 OR4C3Q8NH37 302 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.73□□□□□ -0.21
CD4-212ENST00000544344 PIK3R3Q92569 461 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 HOXB13Q92826 284 aaPredicted RBP13.73□□□□□ -0.21
CD4-212ENST00000544344 ZBTB8AQ96BR9 441 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 ELP4Q96EB1 424 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 NAPGQ99747 312 aaPredicted RBP13.73□□□□□ -0.21
CD4-212ENST00000544344 BEX2Q9BXY8 128 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 SRXN1Q9BYN0 137 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 POTEKPQ9BYX7 375 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 SHCBP1LQ9BZQ2 653 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 KCNF1Q9H3M0 494 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 GLIPR2Q9H4G4 154 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 MED17Q9NVC6 651 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 TAS2R7Q9NYW3 318 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 CISD1Q9NZ45 108 aaKnown RBP13.73□□□□□ -0.21
CD4-212ENST00000544344 KLHL13Q9P2N7 655 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 MRTO4Q9UKD2 239 aaKnown RBP13.73□□□□□ -0.21
CD4-212ENST00000544344 SNX8Q9Y5X2 465 aa13.73□□□□□ -0.21
CD4-212ENST00000544344 ELOA3DA6NLF2 546 aaPredicted RBP13.72□□□□□ -0.21
CD4-212ENST00000544344 EFNA2O43921 213 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 KRT6AP02538 564 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 KRT6BP04259 564 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 GABRA3P34903 492 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 KRT6CP48668 564 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 PSMD4P55036 377 aaKnown RBP13.72□□□□□ -0.21
CD4-212ENST00000544344 C21orf58P58505 322 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 CAV1Q03135 178 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 CLCQ05315 142 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 ACSM2AQ08AH3 577 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 NRF1Q16656 503 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 ELOA3BQ3SY89 546 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 ACSM2BQ68CK6 577 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 GTF2IRD2BQ6EKJ0 949 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms