RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PDXPQ96GD0 296 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 NTMT1Q9BV86 223 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RBM24Q9BX46 236 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 OPA3Q9H6K4 179 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ADAMTS6Q9UKP5 1117 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 FABP12A6NFH5 140 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 PGPEP1LA6NFU8 196 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 SAGE2PA6NJ88 616 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 FOXE1O00358 373 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 UBL4AP11441 157 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 CD79BP40259 229 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 CAMLGP49069 296 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 STARP49675 285 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 DCAF7P61962 342 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 CSNK2A1P68400 391 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 C6orf132Q5T0Z8 1188 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 C1orf185Q5T7R7 199 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RFLNAQ6ZTI6 216 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 USP43Q70EL4 1123 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 LTB4R2Q9NPC1 389 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 IL37Q9NZH6 218 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 MROH6A6NGR9 719 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PNMTP11086 282 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PHC1P78364 1004 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CBFBQ13951 182 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 MAD2L1BPQ15013 274 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 EXOC3L2Q2M3D2 409 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 JMJD6Q6NYC1 403 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PGBD5Q8N414 524 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF565Q8N9K5 539 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PSD4Q8NDX1 1056 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 OR52R1Q8NGF1 315 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 OR14A16Q8NHC5 309 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SPRYD4Q8WW59 207 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM80Q96HE8 168 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF597Q96LX8 424 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 BTBD2Q9BX70 525 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ZDHHC5Q9C0B5 715 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 FGF22Q9HCT0 170 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 TBCCD1Q9NVR7 557 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PLEKHA6Q9Y2H5 1048 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 EXOSC1Q9Y3B2 195 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SPTA1P02549 2419 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 KRBA1A5PL33 1030 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 FAM172BPA6NC97 362 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 C5orf51A6NDU8 294 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 FGF4P08620 206 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 GPR4P46093 362 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SOX2P48431 317 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CTXN1P60606 82 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 HYAL1Q12794 435 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ERV3-1Q14264 604 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 COQ5Q5HYK3 327 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 NHSL2Q5HYW2 709 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SPIN3Q5JUX0 258 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 OGFOD2Q6N063 350 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 MINDY1Q8N5J2 469 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CISD2Q8N5K1 135 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 BOLLQ8N9W6 283 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PROKR1Q8TCW9 393 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 AKAP1Q92667 903 aaKnown RBP eCLIP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 RAB24Q969Q5 203 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 NXPE2Q96DL1 559 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PKP2Q99959 881 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 EDEM2Q9BV94 578 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 GON7Q9BXV9 100 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 AKIRIN1Q9H9L7 192 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 MYNNQ9NPC7 610 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CD93Q9NPY3 652 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 DHCR7Q9UBM7 475 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF639Q9UID6 485 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CLEC4EQ9ULY5 219 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC35A3Q9Y2D2 325 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 TNRC6CQ9HCJ0 1690 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 GGT3PA6NGU5 568 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC22A31A6NKX4 558 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 TBX10O75333 385 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 OXSR1O95747 527 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PF4P02776 101 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CSN2P05814 226 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF35P13682 527 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SDC1P18827 310 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CTGFP29279 349 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ADRA1AP35348 466 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC26A5P58743 744 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 NKAIN2Q5VXU1 208 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ABHD12BQ7Z5M8 362 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ADIPOR2Q86V24 386 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC37A2Q8TED4 501 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PDLIM5Q96HC4 596 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 MSLNLQ96KJ4 702 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 MRGPRX1Q96LB2 322 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 LURAP1Q96LR2 239 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CTRCQ99895 268 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 GSTO2Q9H4Y5 243 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ATP13A2Q9NQ11 1180 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ACOX3O15254 700 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 HRGP04196 525 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CPMP14384 443 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 MPP2Q14168 576 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms