RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 FER1L5A0AVI2 2057 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 UNC13CQ8NB66 2214 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 CABIN1Q9Y6J0 2220 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 CDHR4A6H8M9 788 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 FAM86C2PA6NEL3 165 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 VSTM2BA6NLU5 285 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 NPIPB9F8W1W9 429 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 PEX12O00623 359 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 AP3D1O14617 1153 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 CPNE3O75131 537 aaKnown RBP8.63□□□□□ -1.03
GNE-206ENST00000543356 OR5F1O95221 314 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 IGKV1D-16P01601 117 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 ZGLP1P0C6A0 271 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 CCKBRP32239 447 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 TPD52P55327 224 aaPredicted RBP8.63□□□□□ -1.03
GNE-206ENST00000543356 TAS2R41P59536 307 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 IL1RL1Q01638 556 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 MC2RQ01718 297 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 OCA2Q04671 838 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 SEC23BQ15437 767 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 ZNF141Q15928 474 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 OVCH1Q7RTY7 1134 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 TSPYL5Q86VY4 417 aaPredicted RBP8.63□□□□□ -1.03
GNE-206ENST00000543356 ZSCAN1Q8NBB4 408 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 AQP11Q8NBQ7 271 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 MORN4Q8NDC4 146 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 DIO2Q92813 273 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 NIPSNAP1Q9BPW8 284 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 SLC26A1Q9H2B4 701 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 APMAPQ9HDC9 416 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 FBXO8Q9NRD0 319 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 RXFP3Q9NSD7 469 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 CBLCQ9ULV8 474 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 SDK1Q7Z5N4 2213 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 FRG2CA6NGY1 282 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 OR6C76A6NM76 312 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 TPST2O60704 377 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 FMO6PO60774 539 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 CCNYL3P0C7X3 344 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 CD59P13987 128 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 IFNA8P32881 189 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 POLR2IP36954 125 aaKnown RBP8.63□□□□□ -1.03
GNE-206ENST00000543356 PPICP45877 212 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 EIF2B2P49770 351 aaKnown RBP8.63□□□□□ -1.03
GNE-206ENST00000543356 BCAP31P51572 246 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 ZNF136P52737 540 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 NUP107P57740 925 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 DCAF7P61962 342 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 MRPL2Q5T653 305 aaKnown RBP8.63□□□□□ -1.03
GNE-206ENST00000543356 ZAR1Q86SH2 424 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 RANBP3LQ86VV4 465 aaPredicted RBP8.63□□□□□ -1.03
GNE-206ENST00000543356 NAXDQ8IW45 347 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 BCORP1Q8N888 145 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 TOR1AIP2Q8NFQ8 470 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 OR4N2Q8NGD1 307 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 SLC7A13Q8TCU3 470 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 APOL4Q9BPW4 351 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 DGCR6LQ9BY27 220 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 B3GNT4Q9C0J1 378 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 ING2Q9H160 280 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 GMPPBQ9Y5P6 360 aa8.63□□□□□ -1.03
GNE-206ENST00000543356 CCDC88CQ9P219 2028 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 NPIPA5A0A0B4J1W7 369 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 CCDC160A6NGH7 325 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 NOTOA8MTQ0 251 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 A8MUA0 341 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 B4E171 279 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 NPIPA7E9PJI5 369 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 CDX4O14627 284 aaPredicted RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 POLR1CO15160 346 aaPredicted RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 FRS3O43559 492 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 SEC24DO94855 1032 aaPredicted RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 TFAP2AP05549 437 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 NPIPA8P0DM63 369 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ATXN8OSP0DMR3 200 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 CYP4B1P13584 511 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 DRD5P21918 477 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 TCEA1P23193 301 aaKnown RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 TSPAN7P41732 249 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 UGT2B15P54855 530 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ISL1P61371 349 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ST3GAL3Q11203 375 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 TRAM2Q15035 370 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ENTPD8Q5MY95 495 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 RBM48Q5RL73 367 aaKnown RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 PGBD2Q6P3X8 592 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 PODNL1Q6PEZ8 512 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 PLEKHM3Q6ZWE6 761 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 CMIPQ8IY22 773 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ZNF321PQ8N8H1 164 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 TSPAN14Q8NG11 270 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 OR1N1Q8NGS0 311 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 HDAC2Q92769 488 aaKnown RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 HRASLS5Q96KN8 279 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 LRFN5Q96NI6 719 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 MCHR1Q99705 422 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 OR8D2Q9GZM6 311 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms