RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SDHAF3Q9NRP4 125 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 SNX13Q9Y5W8 968 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 NPIPA5A0A0B4J1W7 369 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 TRAV17A0A0B4J275 112 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 A0A1W2PQD3 144 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 NPIPA7E9PJI5 369 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 NPIPA8P0DM63 369 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 CCL3P10147 92 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 MSX2P35548 267 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-205ENST00000542541 PDZK1Q5T2W1 519 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 SLC25A25Q6KCM7 469 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ASB18Q6ZVZ8 466 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ARMC8Q8IUR7 673 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ZNF614Q8N883 585 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 RNF138Q8WVD3 245 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 RASSF5Q8WWW0 418 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ANGPTL4Q9BY76 406 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 QRSL1Q9H0R6 528 aaKnown RBP21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ARMC7Q9H6L4 198 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-205ENST00000542541 FLRT3Q9NZU0 649 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 SEC14L3Q9UDX4 400 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 KCNE5Q9UJ90 142 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 CNOT11Q9UKZ1 510 aaKnown RBP21.18■□□□□ 0.98
HOMER3-205ENST00000542541 KLF13Q9Y2Y9 288 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-205ENST00000542541 CPAMD8Q8IZJ3 1885 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 SNX4O95219 450 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 THBS1P07996 1170 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 SP1P08047 785 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 SFTPCP11686 197 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 RPS4Y1P22090 263 aaKnown RBP21.17■□□□□ 0.98
HOMER3-205ENST00000542541 ZSWIM7Q19AV6 140 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 ZNF311Q5JNZ3 666 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 TMEM178AQ8NBL3 297 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 CATSPER1Q8NEC5 780 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 BHLHE22Q8NFJ8 381 aaPredicted RBP21.17■□□□□ 0.98
HOMER3-205ENST00000542541 FAM162AQ96A26 154 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 CCDC124Q96CT7 223 aaKnown RBP21.17■□□□□ 0.98
HOMER3-205ENST00000542541 ASB9Q96DX5 294 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 OSBPL11Q9BXB4 747 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 GORASP2Q9H8Y8 452 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 TP53TG5Q9Y2B4 290 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 PCDHGB6Q9Y5F9 930 aa21.17■□□□□ 0.98
HOMER3-205ENST00000542541 NDUFB5O43674 189 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 GCM2O75603 506 aaPredicted RBP21.16■□□□□ 0.98
HOMER3-205ENST00000542541 PABPC4LP0CB38 370 aaKnown RBP21.16■□□□□ 0.98
HOMER3-205ENST00000542541 CNR1P21554 472 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 ELOAQ14241 798 aaKnown RBP21.16■□□□□ 0.98
HOMER3-205ENST00000542541 MAPK14Q16539 360 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 LIN52Q52LA3 116 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 MISPQ8IVT2 679 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 CMIPQ8IY22 773 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 WDR60Q8WVS4 1066 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 PCDHAC1Q9H158 963 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 ACTR3BQ9P1U1 418 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 CNTRLQ7Z7A1 2325 aa21.16■□□□□ 0.98
HOMER3-205ENST00000542541 ERICH4A6NGS2 130 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 SERINC4A6NH21 518 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 MFN2O95140 757 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 PDGFAP04085 211 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 NID1P14543 1247 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 NCK1P16333 377 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 ADH7P40394 386 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 KCNJ10P78508 379 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 TRAP1Q12931 704 aaKnown RBP21.15■□□□□ 0.98
HOMER3-205ENST00000542541 LRRC23Q53EV4 343 aaPredicted RBP21.15■□□□□ 0.98
HOMER3-205ENST00000542541 ZNF766Q5HY98 468 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 PRAMEF20Q5VT98 475 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 EIF3MQ7L2H7 374 aaKnown RBP21.15■□□□□ 0.98
HOMER3-205ENST00000542541 MARCH3Q86UD3 253 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 PACS2Q86VP3 889 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 DOHHQ9BU89 302 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 ADPRHL2Q9NX46 363 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 KMT2BQ9UMN6 2715 aaPredicted RBP21.15■□□□□ 0.98
HOMER3-205ENST00000542541 KLRC4-KLRK1H3BQV0 150 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 ERVH48-1M5A8F1 160 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 ARPC2O15144 300 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 SCO2O43819 266 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 NME2P1O60361 137 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 ANGPTL1O95841 491 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 NME2P22392 152 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 PRKAR1BP31321 381 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 KCNJ2P63252 427 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 C17orf67Q0P5P2 114 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 FGFBP1Q14512 234 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 APOOLQ6UXV4 268 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 HMGN2P46Q86SG4 172 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 DHFR2Q86XF0 187 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 SCMH1Q96GD3 660 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 NSMCE2Q96MF7 247 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 RNF145Q96MT1 663 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 KLHL1Q9NR64 748 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 ZNF443Q9Y2A4 671 aaPredicted RBP21.15■□□□□ 0.98
HOMER3-205ENST00000542541 SLC35A3Q9Y2D2 325 aa21.15■□□□□ 0.98
HOMER3-205ENST00000542541 K7EM74 188 aa21.14■□□□□ 0.97
HOMER3-205ENST00000542541 GTPBP1O00178 669 aaKnown RBP21.14■□□□□ 0.97
HOMER3-205ENST00000542541 SORBS2O94875 1100 aaKnown RBP21.14■□□□□ 0.97
HOMER3-205ENST00000542541 BICRALQ6AI39 1079 aa21.14■□□□□ 0.97
HOMER3-205ENST00000542541 Q6ZS92 163 aa21.14■□□□□ 0.97
HOMER3-205ENST00000542541 VRK2Q86Y07 508 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms