RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 XIAPP98170 497 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 GCNT1Q02742 428 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 SCGB2A2Q13296 93 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 KARSQ15046 597 aaKnown RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 STX1AQ16623 288 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 SLC25A53Q5H9E4 307 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 TMEM31Q5JXX7 168 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 RAET1GQ6H3X3 334 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ZNF530Q6P9A1 599 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 EMBQ6PCB8 327 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ISLR2Q6UXK2 745 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 WDR88Q6ZMY6 472 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 LINC00299Q6ZSB3 139 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 SYVN1Q86TM6 617 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 SETD3Q86TU7 594 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 ZNF589Q86UQ0 364 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 LACC1Q8IV20 430 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 PSTKQ8IV42 348 aaKnown RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 NUDCD3Q8IVD9 361 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 VSTM4Q8IW00 320 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 FBXW8Q8N3Y1 598 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ZNF321PQ8N8H1 164 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 C12orf29Q8N999 325 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 TTC29Q8NA56 475 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 CCDC197Q8NCU1 140 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 TRPV3Q8NET8 790 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 OR5AP2Q8NGF4 316 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 KCTD4Q8WVF5 259 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 DNAJA4Q8WW22 397 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 HAS2Q92819 552 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 RFT1Q96AA3 541 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 TCEANC2Q96MN5 208 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ZNF641Q96N77 438 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 GUCD1Q96NT3 240 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 SERPINB12Q96P63 405 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 BTBD9Q96Q07 612 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ALKBH7Q9BT30 221 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 ZNF717Q9BY31 904 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 LRRC2Q9BYS8 371 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 NGBQ9NPG2 151 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 PLCXD1Q9NUJ7 323 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 UFSP2Q9NUQ7 469 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 PARVAQ9NVD7 372 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ADAM22Q9P0K1 906 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ANKMY1Q9P2S6 941 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 RSL24D1Q9UHA3 163 aaKnown RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 IL36AQ9UHA7 158 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 CYB5R1Q9UHQ9 305 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 MAN1B1Q9UKM7 699 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 EIF3LQ9Y262 564 aaKnown RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 EXOGQ9Y2C4 368 aaKnown RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 PYGO1Q9Y3Y4 419 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 GMPPBQ9Y5P6 360 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 USP16Q9Y5T5 823 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 U3KQV3 271 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 UBE4BO95155 1302 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 AFF2P51816 1311 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 PDS5BQ9NTI5 1447 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 TEX14Q8IWB6 1497 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 MAGI1Q96QZ7 1491 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 CLTCL1P53675 1640 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 LOC100506127A0A0U1RQW1 187 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TTC26A0AVF1 554 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ESYT2A0FGR8 921 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PQLC2LA1A4F0 135 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 FAM47DPA6NHR8 397 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PCP4L1A6NKN8 68 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 SIGLEC16A6NMB1 481 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 E5RGE8 158 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 E9PAM4 449 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 hCG_2039718K7EN88 272 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PGRMC1O00264 195 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 ANGPT2O15123 496 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 OGTO15294 1046 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PSMD3O43242 534 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 NUDT21O43809 227 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 CACNG3O60359 315 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 BCAS1O75363 584 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 TRIM3O75382 744 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 SURF6O75683 361 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 CDK2AP2O75956 126 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 AKR7A3O95154 331 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 OR6A2O95222 327 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 NSA2O95478 260 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 OTCP00480 354 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 SERPINA5P05154 406 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ZCCHC18P0CG32 403 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 F3P13726 295 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PRG2P13727 222 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CCDC130P13994 396 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 RAB3AP20336 220 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 LHCGRP22888 699 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 GIFP27352 417 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PDHA2P29803 388 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 MARCKSP29966 332 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 SERPINB1P30740 379 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CDH5P33151 784 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 SERPINB5P36952 375 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms