RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GTDC1Q4AE62 458 aa8.82□□□□□ -1
YBX3-212ENST00000542002 COX20Q5RI15 118 aa8.82□□□□□ -1
YBX3-212ENST00000542002 WLSQ5T9L3 541 aa8.82□□□□□ -1
YBX3-212ENST00000542002 AP1ARQ63HQ0 302 aa8.82□□□□□ -1
YBX3-212ENST00000542002 SP5Q6BEB4 398 aaPredicted RBP8.82□□□□□ -1
YBX3-212ENST00000542002 ZNF787Q6DD87 383 aa8.82□□□□□ -1
YBX3-212ENST00000542002 HEPHL1Q6MZM0 1159 aa8.82□□□□□ -1
YBX3-212ENST00000542002 MTFR2Q6P444 385 aa8.82□□□□□ -1
YBX3-212ENST00000542002 TNFAIP8L2Q6P589 184 aaPredicted RBP8.82□□□□□ -1
YBX3-212ENST00000542002 ZNF621Q6ZSS3 439 aa8.82□□□□□ -1
YBX3-212ENST00000542002 RNF130Q86XS8 419 aa8.82□□□□□ -1
YBX3-212ENST00000542002 MIER2Q8N344 545 aa8.82□□□□□ -1
YBX3-212ENST00000542002 ZNF808Q8N4W9 903 aaPredicted RBP8.82□□□□□ -1
YBX3-212ENST00000542002 GLB1L3Q8NCI6 653 aaPredicted RBP8.82□□□□□ -1
YBX3-212ENST00000542002 CHDHQ8NE62 594 aaPredicted RBP8.82□□□□□ -1
YBX3-212ENST00000542002 VPS37AQ8NEZ2 397 aa8.82□□□□□ -1
YBX3-212ENST00000542002 OR14L1PQ8NHC6 308 aa8.82□□□□□ -1
YBX3-212ENST00000542002 XAGE5Q8WWM1 108 aa8.82□□□□□ -1
YBX3-212ENST00000542002 MOAP1Q96BY2 351 aa8.82□□□□□ -1
YBX3-212ENST00000542002 C1GALT1C1Q96EU7 318 aa8.82□□□□□ -1
YBX3-212ENST00000542002 PANX1Q96RD7 426 aa8.82□□□□□ -1
YBX3-212ENST00000542002 SLC35A5Q9BS91 424 aa8.82□□□□□ -1
YBX3-212ENST00000542002 CCDC28BQ9BUN5 200 aa8.82□□□□□ -1
YBX3-212ENST00000542002 TBL1XR1Q9BZK7 514 aa8.82□□□□□ -1
YBX3-212ENST00000542002 UCK2Q9BZX2 261 aa8.82□□□□□ -1
YBX3-212ENST00000542002 PRDM14Q9GZV8 571 aa8.82□□□□□ -1
YBX3-212ENST00000542002 SDHAF3Q9NRP4 125 aa8.82□□□□□ -1
YBX3-212ENST00000542002 UBQLN4Q9NRR5 601 aa8.82□□□□□ -1
YBX3-212ENST00000542002 SLAMF8Q9P0V8 285 aa8.82□□□□□ -1
YBX3-212ENST00000542002 SUCOQ9UBS9 1254 aaKnown RBP8.82□□□□□ -1
YBX3-212ENST00000542002 Q9UFV3 132 aa8.82□□□□□ -1
YBX3-212ENST00000542002 PCDHGB4Q9UN71 923 aa8.82□□□□□ -1
YBX3-212ENST00000542002 RNF6Q9Y252 685 aa8.82□□□□□ -1
YBX3-212ENST00000542002 ZNF337Q9Y3M9 751 aa8.82□□□□□ -1
YBX3-212ENST00000542002 ZNF407Q9C0G0 2248 aa8.82□□□□□ -1
YBX3-212ENST00000542002 EXPH5Q8NEV8 1989 aa8.82□□□□□ -1
YBX3-212ENST00000542002 MYO7BQ6PIF6 2116 aa8.81□□□□□ -1
YBX3-212ENST00000542002 FAM234BA2RU67 622 aa8.81□□□□□ -1
YBX3-212ENST00000542002 AHRRA9YTQ3 701 aa8.81□□□□□ -1
YBX3-212ENST00000542002 HMGN4O00479 90 aa8.81□□□□□ -1
YBX3-212ENST00000542002 NDUFB5O43674 189 aa8.81□□□□□ -1
YBX3-212ENST00000542002 WDR1O75083 606 aa8.81□□□□□ -1
YBX3-212ENST00000542002 BCAS1O75363 584 aaPredicted RBP8.81□□□□□ -1
YBX3-212ENST00000542002 CPN1P15169 458 aa8.81□□□□□ -1
YBX3-212ENST00000542002 HOXB9P17482 250 aaPredicted RBP8.81□□□□□ -1
YBX3-212ENST00000542002 HK1P19367 917 aa8.81□□□□□ -1
YBX3-212ENST00000542002 AGAP20933 346 aa8.81□□□□□ -1
YBX3-212ENST00000542002 LCN1P31025 176 aa8.81□□□□□ -1
YBX3-212ENST00000542002 SUCLG1P53597 346 aaKnown RBP8.81□□□□□ -1
YBX3-212ENST00000542002 CLDN18P56856 261 aa8.81□□□□□ -1
YBX3-212ENST00000542002 GUCY1A3Q02108 690 aa8.81□□□□□ -1
YBX3-212ENST00000542002 SRYQ05066 204 aa8.81□□□□□ -1
YBX3-212ENST00000542002 SF3A3Q12874 501 aaKnown RBP eCLIP8.81□□□□□ -1
YBX3-212ENST00000542002 ART3Q13508 389 aa8.81□□□□□ -1
YBX3-212ENST00000542002 NDUFAF6Q330K2 333 aa8.81□□□□□ -1
YBX3-212ENST00000542002 ARHGAP11BQ3KRB8 267 aa8.81□□□□□ -1
YBX3-212ENST00000542002 ACSF3Q4G176 576 aaPredicted RBP8.81□□□□□ -1
YBX3-212ENST00000542002 TIGD2Q4W5G0 525 aa8.81□□□□□ -1
YBX3-212ENST00000542002 C1orf185Q5T7R7 199 aa8.81□□□□□ -1
YBX3-212ENST00000542002 TMEM211Q6ICI0 200 aa8.81□□□□□ -1
YBX3-212ENST00000542002 CGB2Q6NT52 195 aa8.81□□□□□ -1
YBX3-212ENST00000542002 BHLHB9Q6PI77 547 aa8.81□□□□□ -1
YBX3-212ENST00000542002 POMZP3Q6PJE2 187 aa8.81□□□□□ -1
YBX3-212ENST00000542002 XKRXQ6PP77 449 aa8.81□□□□□ -1
YBX3-212ENST00000542002 SLC2A7Q6PXP3 512 aa8.81□□□□□ -1
YBX3-212ENST00000542002 BLOC1S3Q6QNY0 202 aa8.81□□□□□ -1
YBX3-212ENST00000542002 CBLN3Q6UW01 205 aa8.81□□□□□ -1
YBX3-212ENST00000542002 B3GNT6Q6ZMB0 384 aa8.81□□□□□ -1
YBX3-212ENST00000542002 ACAD11Q709F0 780 aa8.81□□□□□ -1
YBX3-212ENST00000542002 HMGN2P46Q86SG4 172 aa8.81□□□□□ -1
YBX3-212ENST00000542002 LSRQ86X29 649 aaPredicted RBP8.81□□□□□ -1
YBX3-212ENST00000542002 NAXEQ8NCW5 288 aa8.81□□□□□ -1
YBX3-212ENST00000542002 TNIP2Q8NFZ5 429 aa8.81□□□□□ -1
YBX3-212ENST00000542002 OR4K17Q8NGC6 315 aa8.81□□□□□ -1
YBX3-212ENST00000542002 POC1BQ8TC44 478 aa8.81□□□□□ -1
YBX3-212ENST00000542002 PNPT1Q8TCS8 783 aaKnown RBP8.81□□□□□ -1
YBX3-212ENST00000542002 ZFP90Q8TF47 636 aa8.81□□□□□ -1
YBX3-212ENST00000542002 GTF2H4Q92759 462 aa8.81□□□□□ -1
YBX3-212ENST00000542002 SDCCAG3Q96C92 435 aa8.81□□□□□ -1
YBX3-212ENST00000542002 ARSGQ96EG1 525 aa8.81□□□□□ -1
YBX3-212ENST00000542002 AURKBQ96GD4 344 aaPredicted RBP8.81□□□□□ -1
YBX3-212ENST00000542002 SH3YL1Q96HL8 342 aaPredicted RBP8.81□□□□□ -1
YBX3-212ENST00000542002 SLC35G5Q96KT7 338 aa8.81□□□□□ -1
YBX3-212ENST00000542002 ZBTB18Q99592 522 aa8.81□□□□□ -1
YBX3-212ENST00000542002 TUBA1CQ9BQE3 449 aa8.81□□□□□ -1
YBX3-212ENST00000542002 ZNF385DQ9H6B1 395 aa8.81□□□□□ -1
YBX3-212ENST00000542002 NPHS2Q9NP85 383 aa8.81□□□□□ -1
YBX3-212ENST00000542002 DCTN4Q9UJW0 460 aa8.81□□□□□ -1
YBX3-212ENST00000542002 MKLN1Q9UL63 735 aa8.81□□□□□ -1
YBX3-212ENST00000542002 PCDHGB3Q9Y5G1 929 aa8.81□□□□□ -1
YBX3-212ENST00000542002 DOPEY1Q5JWR5 2465 aa8.81□□□□□ -1
YBX3-212ENST00000542002 GTF3C1Q12789 2109 aa8.8□□□□□ -1
YBX3-212ENST00000542002 A0A1W2PQD3 144 aa8.8□□□□□ -1
YBX3-212ENST00000542002 DUXAA6NLW8 204 aa8.8□□□□□ -1
YBX3-212ENST00000542002 FIGNL2A6NMB9 653 aa8.8□□□□□ -1
YBX3-212ENST00000542002 SCDO00767 359 aa8.8□□□□□ -1
YBX3-212ENST00000542002 RFXANKO14593 260 aa8.8□□□□□ -1
YBX3-212ENST00000542002 POLR3GO15318 223 aaPredicted RBP8.8□□□□□ -1
YBX3-212ENST00000542002 EFNA2O43921 213 aa8.8□□□□□ -1
YBX3-212ENST00000542002 UGT2B17O75795 530 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms