RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 ALKBH2Q6NS38 261 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 SEZ6L2Q6UXD5 910 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 TIFABQ6ZNK6 161 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 LSRQ86X29 649 aaPredicted RBP13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 CEP112Q8N8E3 955 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 MZB1Q8WU39 189 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 TMEM171Q8WVE6 324 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 HOXB13Q92826 284 aaPredicted RBP13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 DTNBP1Q96EV8 351 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 GMPPAQ96IJ6 420 aaPredicted RBP13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 RNF145Q96MT1 663 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 MIEF1Q9NQG6 463 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 SDHAF3Q9NRP4 125 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 CCL27Q9Y4X3 112 aa13.81□□□□□ -0.2
CLSTN3-213ENST00000541953 A0A1W2PRB8 838 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 SERTM1A2A2V5 107 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 RNF223E7ERA6 249 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 G3V2L1 256 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 LINC01387J3KSC0 135 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 OIP5O43482 229 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 SOD3P08294 240 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 FCGR2AP12318 317 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 EFNA1P20827 205 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 AGTR1P30556 359 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 NTSP30990 170 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 PKNOX1P55347 436 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 PPP2R2BQ00005 443 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 OCRLQ01968 901 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 SLC18A2Q05940 514 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 FGFBP1Q14512 234 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 CD226Q15762 336 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 FIGNL1Q6PIW4 674 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 GTPBP8Q8N3Z3 284 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 ROBO4Q8WZ75 1007 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 AKAP1Q92667 903 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 ZNF524Q96C55 264 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 SH3YL1Q96HL8 342 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 SRXN1Q9BYN0 137 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 SHCBP1LQ9BZQ2 653 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 C12orf65Q9H3J6 166 aaKnown RBP13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 MED17Q9NVC6 651 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 GRID1Q9ULK0 1009 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 LAMP3Q9UQV4 416 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
CLSTN3-213ENST00000541953 ALG1L2C9J202 215 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 EFNA2O43921 213 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 GCM2O75603 506 aaPredicted RBP13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 NKX2-2O95096 273 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 PLGP00747 810 aaPredicted RBP13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 ZNF17P17021 662 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 CDKN1AP38936 164 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 CKAP4Q07065 602 aaKnown RBP13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 C17orf67Q0P5P2 114 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 KIAA0040Q15053 153 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 CCNJQ5T5M9 372 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 NOXRED1Q6NXP6 359 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 NUFIP2Q7Z417 695 aaKnown RBP13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 ZNF619Q8N2I2 560 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 MMGT1Q8N4V1 131 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 CCNYL1Q8N7R7 359 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 ZNF611Q8N823 705 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 SLC16A11Q8NCK7 471 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 OR2V1Q8NHB1 315 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 GPR151Q8TDV0 419 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 ABHD3Q8WU67 409 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 S100PBPQ96BU1 408 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 C16orf58Q96GQ5 468 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 PRRG4Q9BZD6 226 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 CADP27708 2225 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 ABCA1O95477 2261 aa13.79□□□□□ -0.2
CLSTN3-213ENST00000541953 NPIPB8E9PQR5 432 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 ADAMDEC1O15204 470 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 NDUFS7O75251 213 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 CRLF1O75462 422 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 SLITRK5O94991 958 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 PYGBP11216 843 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 EDNRAP25101 427 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 GSTM5P46439 218 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 PRIM2P49643 509 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 CTBP2P56545 445 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 SLC29A2Q14542 456 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 ZNHIT3Q15649 155 aaPredicted RBP13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 DUSP5Q16690 384 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 IMPG1Q17R60 797 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 GLE1Q53GS7 698 aaKnown RBP13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 CLEC6AQ6EIG7 209 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 TRIM46Q7Z4K8 759 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 OR2T11Q8NH01 316 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 CLHC1Q8NHS4 586 aa13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 REPIN1Q9BWE0 567 aaKnown RBP13.78□□□□□ -0.2
CLSTN3-213ENST00000541953 NPIPA5A0A0B4J1W7 369 aa13.77□□□□□ -0.21
CLSTN3-213ENST00000541953 A0A1W2PPM1 405 aa13.77□□□□□ -0.21
CLSTN3-213ENST00000541953 NPIPA7E9PJI5 369 aa13.77□□□□□ -0.21
CLSTN3-213ENST00000541953 OVOL3O00110 214 aa13.77□□□□□ -0.21
CLSTN3-213ENST00000541953 PDPK1O15530 556 aa13.77□□□□□ -0.21
CLSTN3-213ENST00000541953 AKAP10O43572 662 aa13.77□□□□□ -0.21
CLSTN3-213ENST00000541953 NDUFB5O43674 189 aa13.77□□□□□ -0.21
CLSTN3-213ENST00000541953 RSL1D1O76021 490 aaKnown RBP13.77□□□□□ -0.21
CLSTN3-213ENST00000541953 URI1O94763 535 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms