RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 BARD1Q99728 777 aaKnown RBP25.63■■□□□ 1.69
CCM2-218ENST00000541586 WDR77Q9BQA1 342 aaPredicted RBP25.63■■□□□ 1.69
CCM2-218ENST00000541586 CNTNAP3Q9BZ76 1288 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 CACYBPQ9HB71 228 aaKnown RBP25.63■■□□□ 1.69
CCM2-218ENST00000541586 RAB26Q9ULW5 256 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 CFL2Q9Y281 166 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 ALPLP05186 524 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 PRKACGP22612 351 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 PIGAP37287 484 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 RFX3P48380 749 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 TMPRSS3P57727 454 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 SPIBQ01892 262 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 LAPTM4AQ15012 233 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 MAPK14Q16539 360 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 C6orf52Q5T4I8 152 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 TCTN3Q6NUS6 607 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 ZNF605Q86T29 641 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 MORN4Q8NDC4 146 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 OR1N1Q8NGS0 311 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 PMM1Q92871 262 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 ZNF700Q9H0M5 742 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 KCNE5Q9UJ90 142 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 CBLCQ9ULV8 474 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 ZNF232Q9UNY5 417 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 OR10H1Q9Y4A9 318 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 LYVE1Q9Y5Y7 322 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 AP4B1Q9Y6B7 739 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 TPRP12270 2363 aaKnown RBP25.62■■□□□ 1.69
CCM2-218ENST00000541586 NINQ8N4C6 2090 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 NPIPA5A0A0B4J1W7 369 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 NPIPA7E9PJI5 369 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 SEMA7AO75326 666 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 NPIPA8P0DM63 369 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 IL7RP16871 459 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 ARHGDIAP52565 204 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 LARS2Q15031 903 aaKnown RBP25.62■■□□□ 1.69
CCM2-218ENST00000541586 DEF8Q6ZN54 512 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 NRBF2Q96F24 287 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 OSBPL10Q9BXB5 764 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 SMURF2Q9HAU4 748 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 COPS7AQ9UBW8 275 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 POLHQ9Y253 713 aa25.62■■□□□ 1.69
CCM2-218ENST00000541586 ARGFXA6NJG6 315 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 K7ENP7 123 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 FFAR1O14842 300 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 THBS1P07996 1170 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 GUSBP08236 651 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 PPICP45877 212 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 UCNP55089 124 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 CDH12P55289 794 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 CXADRP78310 365 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 PPP2R2BQ00005 443 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 FLYWCH1Q4VC44 716 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 NHSL2Q5HYW2 709 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 INO80CQ6PI98 192 aaPredicted RBP25.61■■□□□ 1.69
CCM2-218ENST00000541586 CLIP4Q8N3C7 705 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 OR6T1Q8NGN1 323 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 RBM4BQ9BQ04 359 aaKnown RBP25.61■■□□□ 1.69
CCM2-218ENST00000541586 RBM4Q9BWF3 364 aaKnown RBP25.61■■□□□ 1.69
CCM2-218ENST00000541586 RLIMQ9NVW2 624 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 SLC13A4Q9UKG4 626 aa25.61■■□□□ 1.69
CCM2-218ENST00000541586 CLDN24A6NM45 220 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 TNFRSF11BO00300 401 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 PRKNO60260 465 aaPredicted RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 HPRP00739 348 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 DBIP07108 87 aaKnown RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 GANABQ14697 944 aaKnown RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 BTBD16Q32M84 506 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 CRTC2Q53ET0 693 aaPredicted RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 ANKRD34AQ69YU3 496 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 ZNF836Q6ZNA1 936 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 C9orf40Q8IXQ3 194 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 BCORP1Q8N888 145 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 FER1L6-AS2Q96M78 137 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 ARHGDIGQ99819 225 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 OSBPL11Q9BXB4 747 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 GABARAPL1Q9H0R8 117 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 SMPD3Q9NY59 655 aaPredicted RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 USE1Q9NZ43 259 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 RHCGQ9UBD6 479 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 ANKRD11Q6UB99 2663 aaPredicted RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 SAGE2PA6NJ88 616 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 UGT2B17O75795 530 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 GPR143P51810 404 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 EEF1A1P68104 462 aaKnown RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 CHAF1BQ13112 559 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 EBPQ15125 230 aaKnown RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 OR4C15Q8NGM1 316 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 OR52J3Q8NH60 311 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 ADIPOR1Q96A54 375 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 G6PC3Q9BUM1 346 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 NXF5Q9H1B4 397 aaKnown RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 ACER3Q9NUN7 267 aa25.6■■□□□ 1.69
CCM2-218ENST00000541586 PDP1Q9P0J1 537 aaPredicted RBP25.6■■□□□ 1.69
CCM2-218ENST00000541586 HPP00738 406 aa25.59■■□□□ 1.69
CCM2-218ENST00000541586 FUT4P22083 530 aa25.59■■□□□ 1.69
CCM2-218ENST00000541586 NPTX1Q15818 432 aa25.59■■□□□ 1.69
CCM2-218ENST00000541586 LIN52Q52LA3 116 aa25.59■■□□□ 1.69
CCM2-218ENST00000541586 DCAF10Q5QP82 559 aa25.59■■□□□ 1.69
CCM2-218ENST00000541586 CYP4Z1Q86W10 505 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms