RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ZCCHC10Q8TBK6 192 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 ADAMTS17Q8TE56 1095 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 GIPC3Q8TF64 312 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 PHF10Q8WUB8 498 aaKnown RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 SLC35B4Q969S0 331 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 CNRIP1Q96F85 164 aaPredicted RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 OR1F2PQ96R84 312 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 SLC29A1Q99808 456 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 MAPKAP1Q9BPZ7 522 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 TREX2Q9BQ50 279 aaPredicted RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 PSD2Q9BQI7 771 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 NDC1Q9BTX1 674 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 PINK1Q9BXM7 581 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 TEX12Q9BXU0 123 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 OR51I1Q9H343 314 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 ANKRD19PQ9H560 264 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 NTN4Q9HB63 628 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 DUSP22Q9NRW4 184 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 SIDT1Q9NXL6 827 aaKnown RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 GMPR2Q9P2T1 348 aaKnown RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 KLHL3Q9UH77 587 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 MRTO4Q9UKD2 239 aaKnown RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 PADI1Q9ULC6 663 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 C19orf53Q9UNZ5 99 aaPredicted RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 USP22Q9UPT9 525 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 POFUT2Q9Y2G5 429 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 NAALAD2Q9Y3Q0 740 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 MMACHCQ9Y4U1 282 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 NOTCH1P46531 2555 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 ANKRD12Q6UB98 2062 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 LOC105369274A0A096LPK9 316 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 TRGV8A0A0C4DH27 118 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 A0A0G2JN53 185 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 LOC102723532A0A0G2JNH3 316 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 C7orf72A4D263 438 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 WASHC1A8K0Z3 465 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 INAFM1C9JVW0 142 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 UPK1AO00322 258 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 HMGN4O00479 90 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 FAAHO00519 579 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 CYR61O00622 381 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 PGRMC2O15173 223 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 HS6ST1O60243 411 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 MFN2O95140 757 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 ALPPP05187 535 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 HMGN2P05204 90 aaKnown RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 BCHEP06276 602 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 THBS1P07996 1170 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 CYC1P08574 325 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 UBTFL6P0CB48 400 aaPredicted RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 ST6GAL1P15907 406 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 EFNA1P20827 205 aaPredicted RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 ENDOUP21128 410 aaKnown RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 LCN1P31025 176 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 PRKAR1BP31321 381 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 RYKP34925 604 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 FEN1P39748 380 aaKnown RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 KCNJ5P48544 419 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 CDK9P50750 372 aaKnown RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 PRKAG1P54619 331 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 NUP107P57740 925 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 CXCR4P61073 352 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 ADARB1P78563 741 aaKnown RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 TEKQ02763 1124 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 MAP4K2Q12851 820 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 COX10Q12887 443 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 GPAT3Q53EU6 434 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 COX20Q5RI15 118 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 C18orf63Q68DL7 685 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 TNFAIP8L2Q6P589 184 aaPredicted RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 XKRXQ6PP77 449 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 TSPYL5Q86VY4 417 aaPredicted RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 EPHX4Q8IUS5 362 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 FAM20CQ8IXL6 584 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 OR4N4Q8N0Y3 316 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 HORMAD2Q8N7B1 307 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 TSPAN14Q8NG11 270 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 OR7G1Q8NGA0 311 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 OR5AK3PQ8NH89 298 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 NCSTNQ92542 709 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 MAL2Q969L2 176 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 TAMM41Q96BW9 452 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 TMEM19Q96HH6 336 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 C7orf34Q96L11 122 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 ART5Q96L15 291 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 C10orf90Q96M02 699 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 TGM7Q96PF1 710 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 SLX1AQ9BQ83 275 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 PIGUQ9H490 435 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 HHATLQ9HCP6 504 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 CCNB1IP1Q9NPC3 277 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 KRT84Q9NSB2 600 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 GPATCH2Q9NW75 528 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 SCN3BQ9NY72 215 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 NDUFAF4Q9P032 175 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 PDP1Q9P0J1 537 aaPredicted RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 C5AR2Q9P296 337 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 PRODH2Q9UF12 536 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 SH3BGRL2Q9UJC5 107 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 ERVK-11Q9UQG0 969 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms