RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 TLX2O43763 284 aaPredicted RBP11.16□□□□□ -0.62
COPS7A-211ENST00000540408 CXCL13O43927 109 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 CD3EP07766 207 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 ATP5F1P24539 256 aaPredicted RBP11.16□□□□□ -0.62
COPS7A-211ENST00000540408 CKAP4Q07065 602 aaKnown RBP11.16□□□□□ -0.62
COPS7A-211ENST00000540408 LCP2Q13094 533 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 GRAMD1BQ3KR37 738 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 HBMQ6B0K9 141 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 ADAM5Q6NVV9 412 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 GTPBP8Q8N3Z3 284 aaPredicted RBP11.16□□□□□ -0.62
COPS7A-211ENST00000540408 OR2V1Q8NHB1 315 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 CEP70Q8NHQ1 597 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 SLC9A6Q92581 669 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 C11orf24Q96F05 449 aaPredicted RBP11.16□□□□□ -0.62
COPS7A-211ENST00000540408 USB1Q9BQ65 265 aaKnown RBP11.16□□□□□ -0.62
COPS7A-211ENST00000540408 C12orf49Q9H741 205 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 PYCARDQ9ULZ3 195 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 RTTNQ86VV8 2226 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 A0A087WUV0 522 aaPredicted RBP11.15□□□□□ -0.62
COPS7A-211ENST00000540408 ALG1L2C9J202 215 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 TNFSF11O14788 317 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 DLX3O60479 287 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 SOX30O94993 753 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 PSMG1O95456 288 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 OPN1LWP04000 364 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 IFI6P09912 130 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 PRPS2P11908 318 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 IL32P24001 234 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 GPC1P35052 558 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 HTR6P50406 440 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 CARD18P57730 90 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 CAPRIN1Q14444 709 aaKnown RBP11.15□□□□□ -0.62
COPS7A-211ENST00000540408 SLC29A2Q14542 456 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 FAM219BQ5XKK7 198 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 FAM71E1Q6IPT2 247 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 APOOLQ6UXV4 268 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 ZNF572Q7Z3I7 529 aaPredicted RBP11.15□□□□□ -0.62
COPS7A-211ENST00000540408 GALNT10Q86SR1 603 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 MISPQ8IVT2 679 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 CEP112Q8N8E3 955 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 MAPK1IP1LQ8NDC0 245 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 FAM76AQ8TAV0 307 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 ACTRT2Q8TDY3 377 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 SMAP2Q8WU79 429 aaPredicted RBP11.15□□□□□ -0.62
COPS7A-211ENST00000540408 DCAKDQ8WVC6 231 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 HSD17B8Q92506 261 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 OSTF1Q92882 214 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 S100PBPQ96BU1 408 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 AMDHD1Q96NU7 426 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 TMEM237Q96Q45 408 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 MYNNQ9NPC7 610 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 EQTNQ9NQ60 294 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 FBXO34Q9NWN3 711 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 TMEM216Q9P0N5 145 aa11.15□□□□□ -0.62
COPS7A-211ENST00000540408 A0A1W2PP18 115 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 GXYLT2A0PJZ3 443 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 C7orf72A4D263 438 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 H3BQF6 201 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 OVOL3O00110 214 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 SCDO00767 359 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 CRCPO75575 148 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 PYGBP11216 843 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 AGTR1P30556 359 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 PRKAA2P54646 552 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 NAA20P61599 178 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 ETF1P62495 437 aaKnown RBP11.14□□□□□ -0.63
COPS7A-211ENST00000540408 SLC18A2Q05940 514 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 RNPS1Q15287 305 aaKnown RBP11.14□□□□□ -0.63
COPS7A-211ENST00000540408 GLE1Q53GS7 698 aaKnown RBP11.14□□□□□ -0.63
COPS7A-211ENST00000540408 NCMAPQ5T1S8 102 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 MFSD12Q6NUT3 480 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 SYT10Q6XYQ8 523 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 IKBIPQ70UQ0 350 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 TRABD2AQ86V40 505 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 HIPK1Q86Z02 1210 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 CDRT4Q8N9R6 151 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 OR6Y1Q8NGX8 325 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 ZFP28Q8NHY6 868 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 RAB3IL1Q8TBN0 382 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 TMEM158Q8WZ71 300 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 PIK3R3Q92569 461 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 CPNE4Q96A23 557 aaPredicted RBP11.14□□□□□ -0.63
COPS7A-211ENST00000540408 L3HYPDHQ96EM0 354 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 ADGRG7Q96K78 797 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 RNF145Q96MT1 663 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 KCNA7Q96RP8 456 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 FMO2Q99518 471 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 ALG2Q9H553 416 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 BARX1Q9HBU1 254 aaPredicted RBP11.14□□□□□ -0.63
COPS7A-211ENST00000540408 MID1IP1Q9NPA3 183 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 FAIMQ9NVQ4 179 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 LIPT1Q9Y234 373 aa11.14□□□□□ -0.63
COPS7A-211ENST00000540408 POLR3HQ9Y535 204 aaPredicted RBP11.14□□□□□ -0.63
COPS7A-211ENST00000540408 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 CHD3Q12873 2000 aaKnown RBP11.13□□□□□ -0.63
COPS7A-211ENST00000540408 A0A0J9YW62 118 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 EXOC1LA0A1B0GW35 172 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 A0A1W2PRB8 838 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 GJE1A6NN92 205 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms