RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 CTSOP43234 321 aaPredicted RBP8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 WNT3AP56704 352 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 UBE2IP63279 158 aaKnown RBP8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 MAD2L1Q13257 205 aaPredicted RBP8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 MINDY4Q4G0A6 757 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 TMEM201Q5SNT2 666 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 IDNKQ5T6J7 187 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 HACD4Q5VWC8 232 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 ZCCHC12Q6PEW1 402 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 CD200R1LQ6Q8B3 271 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 IL20RBQ6UXL0 311 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 HIST3H2AQ7L7L0 130 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 MARCH9Q86YJ5 346 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 SLITRK4Q8IW52 837 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 CMIPQ8IY22 773 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 ARRDC1Q8N5I2 433 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 NEIL3Q8TAT5 605 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 GATAD2BQ8WXI9 593 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 HIST1H2ACQ93077 130 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC25A28Q96A46 364 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 METTL1Q9UBP6 276 aaKnown RBP8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 KCTD3Q9Y597 815 aa8.88□□□□□ -0.99
CTNNA1-243ENST00000540387 A8MVJ9 347 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR7A17O14581 309 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 COCHO43405 550 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 RGS14O43566 566 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 MOCS2O96007 188 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 HLA-DQB2P05538 268 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 ANKRD34CP0C6C1 535 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 FOLR2P14207 255 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 HOXB8P17481 243 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 RBMS1P29558 406 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 CHI3L1P36222 383 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 NPBWR1P48145 328 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 WNT4P56705 351 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 SMAD3P84022 425 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 E2F1Q01094 437 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 TXNDC8Q6A555 127 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 CEACAM20Q6UY09 585 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 FAM122BQ7Z309 247 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 MISPQ8IVT2 679 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 DCUN1D3Q8IWE4 304 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 HDDC3Q8N4P3 179 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 SPICQ8N5J4 248 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 C12orf76Q8N812 135 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 AQP11Q8NBQ7 271 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR52I1Q8NGK6 324 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 GNPDA2Q8TDQ7 276 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 SNX33Q8WV41 574 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OVCA2Q8WZ82 227 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 ORAI1Q96D31 301 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC22A12Q96S37 553 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 DOHHQ9BU89 302 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 POLDIP3Q9BY77 421 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 IGFLR1Q9H665 355 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 UXTQ9UBK9 157 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 A0A1W2PPE3 182 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 A0A1W2PRU2 124 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 HMSDA8MTL9 139 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 C1orf196B1AJZ1 125 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 RAB36O95755 333 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 F12P00748 615 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 HEXAP06865 529 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 BCKDHAP12694 445 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 CNR1P21554 472 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 CCR1P32246 355 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 CSF2RBP32927 897 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 CCR2P41597 374 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR1E2P47887 323 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 AKR1C2P52895 323 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 STARD6P59095 220 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 PSMA6P60900 246 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 PRR5P85299 388 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 AKR1C1Q04828 323 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 INSL4Q14641 139 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 IRF4Q15306 451 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 C18orf21Q32NC0 220 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 ZC3H14Q6PJT7 736 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 NHLRC1Q6VVB1 395 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OAFQ86UD1 273 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 TRMT10AQ8TBZ6 339 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 NTAN1Q96AB6 310 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 C19orf43Q9BQ61 176 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 GGACTQ9BVM4 153 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 LMAN2LQ9H0V9 348 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 ZNF576Q9H609 170 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 WDR26Q9H7D7 661 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 RASL12Q9NYN1 266 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 REV3LO60673 3130 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 FXYD6-FXYD2A0A087WZ82 144 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 C2orf92A0A1B0GVN3 265 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR6C74A6NCV1 312 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 PRKYO43930 277 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR2A4O95047 310 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 NR2F6P10588 404 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 TYRP14679 529 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 ZNF44P15621 663 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 GPX2P18283 190 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 HLA-DPA1P20036 260 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms