RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 NPIPB9F8W1W9 429 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 NDUFB5O43674 189 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 ACTL6AO96019 429 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 IL6P05231 212 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 OR12D1P0DN82 309 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 CD1EP15812 388 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 AGAP20933 346 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 MRPL19P49406 292 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 STARP49675 285 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 POLR2JP52435 117 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 ART3Q13508 389 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 TNFAIP8L2Q6P589 184 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 B3GNT6Q6ZMB0 384 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 IFNEQ86WN2 208 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 CCDC71Q8IV32 467 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 RFWD2Q8NHY2 731 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 VPS33AQ96AX1 596 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 SDCCAG3Q96C92 435 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 CAMK2AQ9UQM7 478 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 RNF6Q9Y252 685 aa16.59■□□□□ 0.25
SNRPA1-203ENST00000540017 A0A1W2PQD3 144 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 PRAMEF27A3QJZ7 478 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 OIP5O43482 229 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 FCMRO60667 390 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 SOX30O94993 753 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 GABRA1P14867 456 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 ATP6V1C1P21283 382 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 CHI3L1P36222 383 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 DCTP40126 519 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 ADH7P40394 386 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 FUT5Q11128 374 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 TIGD2Q4W5G0 525 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 KLHL26Q53HC5 615 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 HEPHL1Q6MZM0 1159 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 ARSKQ6UWY0 536 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF621Q6ZSS3 439 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 FUNDC1Q8IVP5 155 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 OR5M1Q8NGP8 315 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 RND1Q92730 232 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 C1GALT1C1Q96EU7 318 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 KCNE5Q9UJ90 142 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 KIAA1549Q9HCM3 1950 aa16.58■□□□□ 0.24
SNRPA1-203ENST00000540017 A0A0G2JNJ9 132 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 CENPVL1A0A0U1RR11 272 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 FAM234BA2RU67 622 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 DUXAA6NLW8 204 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 AHRRA9YTQ3 701 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 PRSS44E7EML9 344 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 SCDO00767 359 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 RFXANKO14593 260 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 TOXO94900 526 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 CLDN14O95500 239 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 HOXD4P09016 255 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 CPN1P15169 458 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 HPGDP15428 266 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 HK1P19367 917 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 LHX2P50458 406 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 ATP12AP54707 1039 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 ARHGAP11BQ3KRB8 267 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 GTDC1Q4AE62 458 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 ACSF3Q4G176 576 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 FLYWCH1Q4VC44 716 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 COX20Q5RI15 118 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 DNAJC14Q6Y2X3 702 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 RNF130Q86XS8 419 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 XAGE5Q8WWM1 108 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 SH3YL1Q96HL8 342 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 SFXN2Q96NB2 322 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 NPAS1Q99742 590 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 PTGES2Q9H7Z7 377 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 NPHS2Q9NP85 383 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 Q9UFV3 132 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 DCTN4Q9UJW0 460 aa16.57■□□□□ 0.24
SNRPA1-203ENST00000540017 SHISA8B8ZZ34 492 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 HMGN4O00479 90 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 CHMP24386 653 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 HTR1EP28566 365 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 SRYQ05066 204 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 LRRC74AQ0VAA2 488 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 GANABQ14697 944 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF787Q6DD87 383 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 PLXDC2Q6UX71 529 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 PM20D2Q8IYS1 436 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 OR10Q1Q8NGQ4 319 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 PNPT1Q8TCS8 783 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 TUBA1CQ9BQE3 449 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF350Q9GZX5 532 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 HOXD1Q9GZZ0 328 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 SLC52A3Q9NQ40 469 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 COQ3Q9NZJ6 369 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 MKLN1Q9UL63 735 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 KLF2Q9Y5W3 355 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 CRYBG3Q68DQ2 2970 aa16.56■□□□□ 0.24
SNRPA1-203ENST00000540017 ARHGAP21Q5T5U3 1957 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 OR2M5A3KFT3 312 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 C19orf84I3L1E1 186 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 TNFRSF21O75509 655 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 STX11O75558 287 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 EPPINO95925 133 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms