RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ABHD17CQ6PCB6 329 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 CHMP1BQ7LBR1 199 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 C16orf62Q7Z3J2 963 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 TCTE3Q8IZS6 198 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 SAMD12Q8N8I0 201 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 ANKK1Q8NFD2 765 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 OR51G2Q8NGK0 314 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 AKAP1Q92667 903 aaKnown RBP eCLIP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 SECISBP2Q96T21 854 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 TMEM43Q9BTV4 400 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 RNF32Q9H0A6 362 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 CERS4Q9HA82 394 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 TESQ9UGI8 421 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 NCKAP1Q9Y2A7 1128 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 SF3B6Q9Y3B4 125 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 STON1Q9Y6Q2 735 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 PRR19A6NJB7 356 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 CDK2AP1O14519 115 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 SOCS6O14544 535 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 AIFM1O95831 613 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 MRPL3P09001 348 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 GNSP15586 552 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 HIST1H1TP22492 207 aaPredicted RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 HLA-DMAP28067 261 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 SHC1P29353 583 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 PKLRP30613 574 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 CDK5Q00535 292 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 PDGFRLQ15198 375 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 OCLNQ16625 522 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 MRM1Q6IN84 353 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 TMEM91Q6ZNR0 172 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 C9orf62Q8N4C0 152 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 HDDC3Q8N4P3 179 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 OR11H7Q8NGC8 314 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 BTBD1Q9H0C5 482 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 GLTPQ9NZD2 209 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 APOBEC3BQ9UH17 382 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 SIRT4Q9Y6E7 314 aaPredicted RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 A0A087WUU8 490 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 DRD2P14416 443 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 ATP5A1P25705 553 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 ZNF81P51508 661 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 MEDAGQ5VYS4 303 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 C1orf94Q6P1W5 598 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 CD300LDQ6UXZ3 194 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 RPTNQ6XPR3 784 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 HSDL2Q6YN16 418 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 PRSS45Q7RTY3 260 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 CDH24Q86UP0 819 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 VRK2Q86Y07 508 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 GPR135Q8IZ08 494 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 FAM26EQ8N5C1 309 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 ZNF655Q8N720 491 aaPredicted RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 BBS4Q96RK4 519 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 MCOLN1Q9GZU1 580 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 ACSL5Q9ULC5 683 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 PPIEQ9UNP9 301 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 DIMT1Q9UNQ2 313 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 REM1O75628 298 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 EML2O95834 649 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 CFDP00746 253 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 EIF4EP06730 217 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 TRHRP34981 398 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 AHRP35869 848 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 CDH11P55287 796 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 TRA2BP62995 288 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 SLC9A5Q14940 896 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 ZMYND11Q15326 602 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 LTB4RQ15722 352 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 KIAA1211LQ6NV74 962 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 GDPGP1Q6ZNW5 385 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 BPHLQ86WA6 291 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 PLCZ1Q86YW0 608 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 CLDN22Q8N7P3 220 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 SPERTQ8NA61 448 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 OR13C5Q8NGS8 318 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 ORAI1Q96D31 301 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 PITHD1Q9GZP4 211 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 RSPH9Q9H1X1 276 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 BCL2L10Q9HD36 194 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 MRPS30Q9NP92 439 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 ENAMQ9NRM1 1142 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 TRIOO75962 3097 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 SCN2AQ99250 2005 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 PCP4L1A6NKN8 68 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 POM121CA8CG34 1229 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 PDGFAP04085 211 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 CLDN20P56880 219 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 SLC3A1Q07837 685 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 CRYZQ08257 329 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 RUNX3Q13761 415 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 ZNF680Q8NEM1 530 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 OR2L3Q8NG85 312 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 OR9A2Q8NGT5 310 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 OR2L8Q8NGY9 312 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 DHRS9Q9BPW9 319 aa11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 THAP7Q9BT49 309 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 POLDIP3Q9BY77 421 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 WSB2Q9NYS7 404 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-208ENST00000539506 EIF3KQ9UBQ5 218 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms