RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ARMC6Q6NXE6 501 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 CADM3Q8N126 398 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 TM9SF4Q92544 642 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 SLC30A2Q9BRI3 323 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 CCDC32Q9BV29 185 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 JAM3Q9BX67 310 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 POLE4Q9NR33 117 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 FBXO34Q9NWN3 711 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 CYP8B1Q9UNU6 501 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 SF3B6Q9Y3B4 125 aaKnown RBP16.65■□□□□ 0.26
GNE-204ENST00000539208 MN1Q10571 1320 aaPredicted RBP16.65■□□□□ 0.26
GNE-204ENST00000539208 IQCMA0A1B0GVH7 501 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 UNC119BA6NIH7 251 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 SGK494L7N484 410 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 PRG2P13727 222 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 HTR1FP30939 366 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 TNFSF8P32971 234 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 PPP1CAP62136 330 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 EXOSC7Q15024 291 aaKnown RBP16.64■□□□□ 0.25
GNE-204ENST00000539208 SHISA5Q8N114 240 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 FAM83FQ8NEG4 500 aaPredicted RBP16.64■□□□□ 0.25
GNE-204ENST00000539208 FAM174AQ8TBP5 190 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 CEP19Q96LK0 163 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 WDFY2Q96P53 400 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 MED18Q9BUE0 208 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 WSB2Q9NYS7 404 aaPredicted RBP16.64■□□□□ 0.25
GNE-204ENST00000539208 UNC80Q8N2C7 3258 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 SLC35F4A4IF30 521 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 PEX12O00623 359 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 COQ9O75208 318 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 ST6GAL1P15907 406 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 GABRA3P34903 492 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 DSG2Q14126 1118 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 OR2G6Q5TZ20 316 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 ZNF438Q7Z4V0 828 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 DOK4Q8TEW6 326 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 TMEM239Q8WW34 195 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 GATAD2BQ8WXI9 593 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 SLC25A46Q96AG3 418 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 SAMD8Q96LT4 415 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 UBQLN3Q9H347 655 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 FAM60AQ9NP50 221 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 SNTG1Q9NSN8 517 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 C14orf105Q9NVL8 296 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 ZNF229Q9UJW7 825 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 CLCA2Q9UQC9 943 aa16.64■□□□□ 0.25
GNE-204ENST00000539208 HCRTR1O43613 425 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 CBX7O95931 251 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 CH25HO95992 272 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 IGHA1P01876 353 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 GTF2E2P29084 291 aaKnown RBP16.63■□□□□ 0.25
GNE-204ENST00000539208 SLC1A3P43003 542 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 RUNX1T1Q06455 604 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 ACSM1Q08AH1 577 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 FRMD1Q8N878 549 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 POC5Q8NA72 575 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 ZDHHC1Q8WTX9 485 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 UFD1Q92890 307 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 STARD5Q9NSY2 213 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 SIDT1Q9NXL6 827 aaKnown RBP16.63■□□□□ 0.25
GNE-204ENST00000539208 CBLCQ9ULV8 474 aa16.63■□□□□ 0.25
GNE-204ENST00000539208 A0A1W2PPC4 97 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 RDH16O75452 317 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 APOL3O95236 402 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 GKN3PP0CG01 181 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 DRD5P21918 477 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 FGF9P31371 208 aaPredicted RBP16.62■□□□□ 0.25
GNE-204ENST00000539208 GABRA5P31644 462 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 SLC13A2Q13183 592 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 FIGNL1Q6PIW4 674 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 CD200R1LQ6Q8B3 271 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 WDR88Q6ZMY6 472 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 C11orf74Q86VG3 221 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 VWA5B2Q8N398 1253 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 SDHCQ99643 169 aaPredicted RBP16.62■□□□□ 0.25
GNE-204ENST00000539208 ZNF559Q9BR84 538 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 LMF2Q9BU23 707 aaKnown RBP16.62■□□□□ 0.25
GNE-204ENST00000539208 FN3KQ9H479 309 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 TMEM5Q9Y2B1 443 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 GXYLT2A0PJZ3 443 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 SLC30A4O14863 429 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 PLD2O14939 933 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 CHST10O43529 356 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 ZGLP1P0C6A0 271 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 S1PR1P21453 382 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 GCGRP47871 477 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 SEPHS1P49903 392 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 PRTGQ2VWP7 1150 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 RPL13AP3Q6NVV1 102 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 ZNF613Q6PF04 617 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 QSOX2Q6ZRP7 698 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 TMPRSS11FQ6ZWK6 438 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 PARGQ86W56 976 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 ZNF761Q86XN6 746 aaPredicted RBP16.62■□□□□ 0.25
GNE-204ENST00000539208 C19orf47Q8N9M1 422 aaKnown RBP16.62■□□□□ 0.25
GNE-204ENST00000539208 PSD4Q8NDX1 1056 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 OR9A4Q8NGU2 314 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 KLHDC7BQ96G42 594 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 HS6ST2Q96MM7 605 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 KCTD7Q96MP8 289 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms