RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CLDN15P56746 228 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 NUP107P57740 925 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 TXNL4AP83876 142 aaKnown RBP12.43□□□□□ -0.42
CD9-208ENST00000538834 RCAN2Q14206 197 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 GANABQ14697 944 aaKnown RBP12.43□□□□□ -0.42
CD9-208ENST00000538834 MAPK11Q15759 364 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 ZNF141Q15928 474 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 BCL2A1Q16548 175 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.43□□□□□ -0.42
CD9-208ENST00000538834 WLSQ5T9L3 541 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 MTERF4Q7Z6M4 381 aaKnown RBP12.43□□□□□ -0.42
CD9-208ENST00000538834 OR5D16Q8NGK9 328 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 OR4A15Q8NGL6 344 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 OR5M9Q8NGP3 310 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 ZPLD1Q8TCW7 415 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 ZFP90Q8TF47 636 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 OIT3Q8WWZ8 545 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 ABTB1Q969K4 478 aaPredicted RBP12.43□□□□□ -0.42
CD9-208ENST00000538834 C1GALT1C1Q96EU7 318 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 MARK4Q96L34 752 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 OR52E6Q96RD3 313 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 TREX2Q9BQ50 279 aaPredicted RBP12.43□□□□□ -0.42
CD9-208ENST00000538834 KLHDC3Q9BQ90 382 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 NMUR2Q9GZQ4 415 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 DSN1Q9H410 356 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 HHATLQ9HCP6 504 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 SH3BGRL2Q9UJC5 107 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 PCDHGB4Q9UN71 923 aa12.43□□□□□ -0.42
CD9-208ENST00000538834 FAF1Q9UNN5 650 aaPredicted RBP12.43□□□□□ -0.42
CD9-208ENST00000538834 FAM234BA2RU67 622 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 C7orf72A4D263 438 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 CCDC154A6NI56 674 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 CD8B2A6NJW9 211 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 FIGNL2A6NMB9 653 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 KDM4EB2RXH2 506 aaPredicted RBP12.42□□□□□ -0.42
CD9-208ENST00000538834 ETV2O00321 342 aaPredicted RBP12.42□□□□□ -0.42
CD9-208ENST00000538834 SCO2O43819 266 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 FCMRO60667 390 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 TRAPPC6AO75865 159 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 CPSF4O95639 269 aaKnown RBP12.42□□□□□ -0.42
CD9-208ENST00000538834 ESRRAP11474 423 aaPredicted RBP12.42□□□□□ -0.42
CD9-208ENST00000538834 CD1EP15812 388 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 ZNF708P17019 499 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 DPP4P27487 766 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 MSX1P28360 303 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 TIMP3P35625 211 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 POLR2JP52435 117 aaKnown RBP12.42□□□□□ -0.42
CD9-208ENST00000538834 ATP12AP54707 1039 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 AQP5P55064 265 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 CLDN18P56856 261 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 RPS26P62854 115 aaKnown RBP12.42□□□□□ -0.42
CD9-208ENST00000538834 CD226Q15762 336 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 ZNF630Q2M218 657 aaPredicted RBP12.42□□□□□ -0.42
CD9-208ENST00000538834 C1orf185Q5T7R7 199 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 NXNQ6DKJ4 435 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 BLOC1S3Q6QNY0 202 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 ACAD11Q709F0 780 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 GALNT10Q86SR1 603 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 MISPQ8IVT2 679 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 PM20D2Q8IYS1 436 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 MIER2Q8N344 545 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 LILRB4Q8NHJ6 448 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 DYDC1Q8WWB3 177 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 GTF2H4Q92759 462 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 SLC35G5Q96KT7 338 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 HOXD1Q9GZZ0 328 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 OR51I1Q9H343 314 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 ACBD3Q9H3P7 528 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 POLE3Q9NRF9 147 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 TAS2R10Q9NYW0 307 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 MED11Q9P086 117 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 PPP4R1LQ9P1A2 415 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 ACAD8Q9UKU7 415 aa12.42□□□□□ -0.42
CD9-208ENST00000538834 TRBV5-3A0A0A0MS03 114 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 HMGN4O00479 90 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 POLR3GO15318 223 aaPredicted RBP12.41□□□□□ -0.42
CD9-208ENST00000538834 HCRTR2O43614 444 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 AGR2O95994 175 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 FBN2P35556 2912 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 CLK3P49761 638 aaKnown RBP12.41□□□□□ -0.42
CD9-208ENST00000538834 SMSP52788 366 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 DLX5P56178 289 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 PLAURQ03405 335 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 TFF3Q07654 80 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 SPDYE7PQ495Y7 208 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 ACSF3Q4G176 576 aaPredicted RBP12.41□□□□□ -0.42
CD9-208ENST00000538834 LRIF1Q5T3J3 769 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 RIPPLY2Q5TAB7 128 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 NSUN5P2Q63ZY6 315 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 CGB2Q6NT52 195 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 B3GNT6Q6ZMB0 384 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 SZRD1Q7Z422 152 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 FAM71CQ8NEG0 241 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 RFWD2Q8NHY2 731 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 ZNF524Q96C55 264 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 DTNBP1Q96EV8 351 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 PANX1Q96RD7 426 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 SIKE1Q9BRV8 207 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 SLC35A5Q9BS91 424 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 TBL1XR1Q9BZK7 514 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms