RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 PCYT1AP49585 367 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 DSG2Q14126 1118 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 CTF1Q16619 201 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 PDZK1Q5T2W1 519 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 NRMQ8IXM6 262 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 FAM26EQ8N5C1 309 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 RCBTB1Q8NDN9 531 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 OR7G1Q8NGA0 311 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 GAB3Q8WWW8 586 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 PTCHD1Q96NR3 888 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 YIPF2Q9BWQ6 316 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 CDCA4Q9BXL8 241 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 ZNF768Q9H5H4 540 aaKnown RBP13.72□□□□□ -0.21
ATL3-203ENST00000538786 EGLN3Q9H6Z9 239 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 C14orf105Q9NVL8 296 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 TVP23BQ9NYZ1 205 aa13.72□□□□□ -0.21
ATL3-203ENST00000538786 DHCR7Q9UBM7 475 aaKnown RBP13.72□□□□□ -0.21
ATL3-203ENST00000538786 COL6A3P12111 3177 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 TMX2-CTNND1H3BSU7 103 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 BCAS1O75363 584 aaPredicted RBP13.71□□□□□ -0.21
ATL3-203ENST00000538786 CT45A8P0DMV1 189 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 CT45A9P0DMV2 189 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 PLAURQ03405 335 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 IRF3Q14653 427 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 OR1Q1Q15612 314 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 CT45A2Q5DJT8 189 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 YOD1Q5VVQ6 348 aaPredicted RBP13.71□□□□□ -0.21
ATL3-203ENST00000538786 ACSM5Q6NUN0 579 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 SLC27A4Q6P1M0 643 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 MRGPREQ86SM8 312 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 P2RY8Q86VZ1 359 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 MEX3DQ86XN8 651 aaKnown RBP13.71□□□□□ -0.21
ATL3-203ENST00000538786 GATAD2AQ86YP4 633 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 GRAMD2AQ8IUY3 354 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 TCEANCQ8N8B7 351 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 C9orf43Q8TAL5 461 aaPredicted RBP13.71□□□□□ -0.21
ATL3-203ENST00000538786 SAP25Q8TEE9 199 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.71□□□□□ -0.21
ATL3-203ENST00000538786 PRSS27Q9BQR3 290 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 ZNF559Q9BR84 538 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 NUDT22Q9BRQ3 303 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 ITPAQ9BY32 194 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 PLA2G12AQ9BZM1 189 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 PRODH2Q9UF12 536 aa13.71□□□□□ -0.21
ATL3-203ENST00000538786 IGKV3D-11A0A0A0MRZ8 115 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 C17orf105B2RV13 164 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 DSCR3O14972 297 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 LAMTOR5O43504 91 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 PRKYO43930 277 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 LYPD3O95274 346 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 CLPSP04118 112 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 RNF144AP50876 292 aaPredicted RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 PSMD4P55036 377 aaKnown RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 EFNB1P98172 346 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 SQSTM1Q13501 440 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 NR0B2Q15466 257 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 ZNF141Q15928 474 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 ZSWIM7Q19AV6 140 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 PLK5Q496M5 336 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 MFSD4BQ5TF39 518 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 MEDAGQ5VYS4 303 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 PLAG1Q6DJT9 500 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 QSOX2Q6ZRP7 698 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 RNF113BQ8IZP6 322 aaKnown RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 POGLUT1Q8NBL1 392 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 C7orf57Q8NEG2 295 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 OR4C6Q8NH72 309 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 PTPMT1Q8WUK0 201 aaPredicted RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 ZNF501Q96CX3 271 aaPredicted RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 CRELD1Q96HD1 420 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 DSN1Q9H410 356 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 FGF21Q9NSA1 209 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 DNAJC27Q9NZQ0 273 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 CBLCQ9ULV8 474 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 RPL36Q9Y3U8 105 aaKnown RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 NINQ8N4C6 2090 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 NPIPB9F8W1W9 429 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 PIP5K1CO60331 668 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 ZNF182P17025 639 aaPredicted RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 AQP6Q13520 282 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 HLA-BQ31612 363 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 PRAMEF17Q5VTA0 474 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 TMEM71Q6P5X7 295 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 ZNF613Q6PF04 617 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 OR8D4Q8NGM9 314 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 CNOT9Q92600 299 aaKnown RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 OSTF1Q92882 214 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 SLC35B4Q969S0 331 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 PRRG3Q9BZD7 231 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 ZNF304Q9HCX3 659 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 IL20Q9NYY1 176 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.7□□□□□ -0.22
ATL3-203ENST00000538786 OR10H1Q9Y4A9 318 aa13.7□□□□□ -0.22
ATL3-203ENST00000538786 TP53BP1Q12888 1972 aaPredicted RBP13.7□□□□□ -0.22
ATL3-203ENST00000538786 SCN2AQ99250 2005 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 A0A1B0GX78 115 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 SLC22A1O15245 554 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 TLX2O43763 284 aaPredicted RBP13.69□□□□□ -0.22
ATL3-203ENST00000538786 DYRK3O43781 588 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms