RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 NUDT4Q9NZJ9 180 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 CPA4Q9UI42 421 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 SHROOM3Q8TF72 1996 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 C2orf92A0A1B0GVN3 265 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 CXorf65A6NEN9 183 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 OR51F1A6NGY5 319 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 GLTPD2A6NH11 291 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 DDTLA6NHG4 134 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 OR7A17O14581 309 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 CTDSPLO15194 276 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 LRRTM2O43300 516 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 TLX2O43763 284 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 F2P00734 622 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 F12P00748 615 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 ADH1AP07327 375 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 RHOP08100 348 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 AQP1P29972 269 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 LIMS1P48059 325 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 GNG10P50151 68 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 ADPRHP54922 357 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 CLN3Q13286 438 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 XKR6Q5GH73 641 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 ATPAF1Q5TC12 328 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 LIPNQ5VXI9 398 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 CEACAM20Q6UY09 585 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 OR10J5Q8NHC4 309 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 CD99L2Q8TCZ2 262 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 THEM6Q8WUY1 208 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 PIGKQ92643 395 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 MGME1Q9BQP7 344 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 FDXACB1Q9BRP7 624 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 KCNK12Q9HB15 430 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 MRPS18AQ9NVS2 196 aaKnown RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 PTGFRNQ9P2B2 879 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 FBXL21Q9UKT6 434 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 RASD1Q9Y272 281 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM184BQ9Y519 407 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 PCDHB11Q9Y5F2 797 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 CD8B2A6NJW9 211 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 FADS1O60427 444 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 CD8BP10966 210 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 ACP2P11117 423 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 PCGF2P35227 344 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 GDNFP39905 211 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 MVDP53602 400 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 IL2P60568 153 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 PITX1P78337 314 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 SIM1P81133 766 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 FAM189BP81408 668 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 PRR5P85299 388 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 OR8G1Q15617 311 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 MPPED2Q15777 294 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 IL20RBQ6UXL0 311 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 RGL4Q8IZJ4 473 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF614Q8N883 585 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 ZFP41Q8N8Y5 198 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 OR6B3Q8NGW1 331 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 STOML3Q8TAV4 291 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 GEMIN6Q8WXD5 167 aaKnown RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC25A28Q96A46 364 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 MARS2Q96GW9 593 aaKnown RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 CDCA3Q99618 268 aaPredicted RBP8□□□□□ -1.13
SRGAP1-202ENST00000537556 BCO1Q9HAY6 547 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 C2orf42Q9NWW7 574 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 OR12D3Q9UGF7 316 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 FBXW11Q9UKB1 542 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 CAMK2AQ9UQM7 478 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 GBF1Q92538 1859 aa8□□□□□ -1.13
SRGAP1-202ENST00000537556 C2orf78A6NCI8 922 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 KDM4EB2RXH2 506 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 CCL22O00626 93 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC25A12O75746 678 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 EBLN1P0CF75 366 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 CD86P42081 329 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 GLP1RP43220 463 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 OR1E2P47887 323 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 CDX1P47902 265 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 STC1P52823 247 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 CRYBA2P53672 197 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 SRSF11Q05519 484 aaKnown RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC35D3Q5M8T2 416 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 MBOAT1Q6ZNC8 495 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF546Q86UE3 836 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 HASPINQ8TF76 798 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 SMIM4Q8WVI0 70 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TEX12Q9BXU0 123 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TPT1P8Q9HAU6 139 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 MYOZ2Q9NPC6 264 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 PXMP2Q9NR77 195 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TVP23BQ9NYZ1 205 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 FZD4Q9ULV1 537 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 H7C1Q1 480 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TNFRSF10BO14763 440 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 RGS9O75916 674 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 C6orf47O95873 294 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 IFNA17P01571 189 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 HOXB5P09067 269 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 HOXA5P20719 270 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 ADORA2BP29275 332 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 XCR1P46094 333 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms